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Orthologous genes in OrthoFinder**

Species Gene Description
 vvi-u.5   100255908   probable pectin methylesterase CGR2 
 vvi-r.5   100255908   probable pectin methylesterase CGR2 
 vvi-u.5   100244559   probable pectin methylesterase CGR2 
 vvi-u.5   100243785   probable pectin methylesterase CGR3 
 ath-u.5   AT3G49720   uncharacterized protein 
 ath-u.5   CGR3   uncharacterized protein 
 gma-u.5   100800870   uncharacterized LOC100800870 
 gma-u.5   100796049   uncharacterized LOC100796049 
 gma-u.5   100791487   uncharacterized LOC100791487 
 ppo-u.5   7469664   probable pectin methylesterase CGR2 
 ppo-u.5   7470771   probable pectin methylesterase CGR3 
 mtr-u.5   11431552   probable pectin methylesterase CGR2 
 mtr-u.5   25482029   probable pectin methylesterase CGR2 
 sly-u.5   101256717   probable pectin methylesterase CGR3 
 sly-u.5   101249725   probable pectin methylesterase CGR3 
 sly-u.5   101265077   probable pectin methylesterase CGR3 
 osa-u.5   4325464   probable pectin methylesterase CGR2 
 zma-u.5   100272653   uncharacterized LOC100272653 
 zma-u.5   100276063   uncharacterized LOC100276063 

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Top 50 coexpressed genes to 100255908 (vvi-u.5 coexpression data)

 KEGG ID   Pathway name   #genes in coex list   #genes in genome   -log10(p)   Link to the KEGG* map 
(Multiple genes)

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Top 50 enrichment test to 100255908 (vvi-u.5 coexpression data)

CoexMap"100255908"


vviLOC100255908 | Entrez gene ID : 100255908    
Species vvi ath gma ppo mtr sly osa zma bdi hvu bra cit bna sbi ghi sot nta cre tae
Paralog 4 2 3 2 2 3 1 2 0 0 0 0 0 0 0 0 0 0 0
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CoexMap
Chloroplast
Nucleus

functional annotation
KEGG
GO BP
GO:0045488 [list] [network] pectin metabolic process  (12 genes)  IEA  
GO CC
GO MF
GO:0008168 [list] [network] methyltransferase activity  (310 genes)  IEA  
Protein XP_059594604.1 [sequence] [blastp]
XP_059594605.1 [sequence] [blastp]
XP_059594606.1 [sequence] [blastp]
Subcellular
localization
wolf
chlo 10  (predict for XP_059594604.1)
mito 4,  chlo 4,  vacu 1  (predict for XP_059594605.1)
mito 4,  chlo 4,  vacu 1  (predict for XP_059594606.1)
Subcellular
localization
TargetP
chlo 6  (predict for XP_059594604.1)
mito 6,  other 3  (predict for XP_059594605.1)
mito 6,  other 3  (predict for XP_059594606.1)
Gene expression
All samples [Expression pattern]
Tissue specificity*
Show Coexpressed Genes
Gene Function KEGG Entrez
Gene
ID		 Other ID Link Target Reference

vvi-u.5
for
100255908
vvi-r.5
for
100255908
vvi-u.5
for
100244559
vvi-u.5
for
100243785
ath-u.5
for
AT3G49720
ath-u.5
for
CGR3
gma-u.5
for
100800870
gma-u.5
for
100796049
gma-u.5
for
100791487
ppo-u.5
for
7469664
ppo-u.5
for
7470771
mtr-u.5
for
11431552
mtr-u.5
for
25482029
sly-u.5
for
101256717
sly-u.5
for
101249725
sly-u.5
for
101265077
osa-u.5
for
4325464
zma-u.5
for
100272653
zma-u.5
for
100276063


Ortholog ID: 1983
Species vvi vvi ath ath gma gma bra bra ppo ppo mtr ghi ghi bna bna cit cit sly sly sot sot nta nta osa zma zma tae tae hvu sbi bdi
Symbol LOC100243785 LOC100244559 AT3G49720 CGR3 LOC100805476 LOC100778341 LOC103873032 LOC103875453 LOC7469664 LOC7470771 LOC25482029 LOC107935263 LOC107935264 LOC106360577 BNAA09G07220D LOC102624811 LOC102615263 LOC101256717 LOC101245514 LOC102583825 LOC102578463 LOC107828760 LOC107768381 LOC4325464 LOC100272653 LOC100276063 LOC123060057 LOC123068534 LOC123442638 LOC8073315 LOC100827884
Function* probable pectin methylesterase CGR3 probable pectin methylesterase CGR2 uncharacterized protein uncharacterized protein probable pectin methylesterase CGR3 uncharacterized LOC100778341 probable pectin methylesterase CGR2 probable pectin methylesterase CGR2 probable pectin methylesterase CGR2 probable pectin methylesterase CGR3 probable pectin methylesterase CGR2 probable pectin methylesterase CGR2 probable pectin methylesterase CGR2 probable pectin methylesterase CGR2 probable pectin methylesterase CGR3 probable pectin methylesterase CGR2 probable pectin methylesterase CGR2 probable pectin methylesterase CGR3 probable pectin methylesterase CGR2 uncharacterized protein At3g49720-like uncharacterized protein At3g49720-like putative pectin methylesterase CGR3 putative pectin methylesterase CGR3 probable pectin methylesterase CGR2 uncharacterized LOC100272653 uncharacterized LOC100276063 probable pectin methylesterase CGR2 probable pectin methylesterase CGR2 probable pectin methylesterase CGR2 uncharacterized protein At3g49720 uncharacterized protein At3g49720
Coexmap

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Coexpression

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KEGG Info
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
vvi00520 Amino sugar and nucleotide sugar metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
vvi04075 Plant hormone signal transduction 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma04144 Endocytosis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma01230 Biosynthesis of amino acids 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bra03015 mRNA surveillance pathway 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ppo00190 Oxidative phosphorylation 2
ppo04142 Lysosome 2
ppo04145 Phagosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ppo04141 Protein processing in endoplasmic reticulum 3
ppo00520 Amino sugar and nucleotide sugar metabolism 3
ppo01250 Biosynthesis of nucleotide sugars 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi04144 Endocytosis 3
ghi04130 SNARE interactions in vesicular transport 2
ghi04517 IgSF CAM signaling 2
ghi05100 Bacterial invasion of epithelial cells 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi04130 SNARE interactions in vesicular transport 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna00310 Lysine degradation 2
bna00541 Biosynthesis of various nucleotide sugars 2
bna01250 Biosynthesis of nucleotide sugars 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cit04141 Protein processing in endoplasmic reticulum 2
cit04144 Endocytosis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sly01250 Biosynthesis of nucleotide sugars 3
sly04145 Phagosome 2
sly00520 Amino sugar and nucleotide sugar metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sly00270 Cysteine and methionine metabolism 3
sly01230 Biosynthesis of amino acids 3
sly00520 Amino sugar and nucleotide sugar metabolism 2
sly00670 One carbon pool by folate 2
sly00999 Biosynthesis of various plant secondary metabolites 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sot00270 Cysteine and methionine metabolism 4
sot00670 One carbon pool by folate 3
sot01230 Biosynthesis of amino acids 3
sot00999 Biosynthesis of various plant secondary metabolites 2
sot01240 Biosynthesis of cofactors 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sot03018 RNA degradation 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta03010 Ribosome 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
zma04142 Lysosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae00520 Amino sugar and nucleotide sugar metabolism 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae00520 Amino sugar and nucleotide sugar metabolism 3
Expression Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern
Entrez Gene ID* 100243785 100244559 824134 836710 100805476 100778341 103873032 103875453 7469664 7470771 25482029 107935263 107935264 106360577 106441240 102624811 102615263 101256717 101245514 102583825 102578463 107828760 107768381 4325464 100272653 100276063 123060057 123068534 123442638 8073315 100827884
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