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Orthologous genes in OrthoFinder**

Species Gene Description
 vvi-u.5   100257033   protein REDUCED CHLOROPLAST COVERAGE 2 
 vvi-r.5   100257033   protein REDUCED CHLOROPLAST COVERAGE 2 
 vvi-m.5   100257033   protein REDUCED CHLOROPLAST COVERAGE 2 
 ath-u.5   AT4G28080   Tetratricopeptide repeat (TPR)-like superfamily protein 
 gma-u.5   100806823   protein TSS 
 gma-u.5   100792534   protein TSS 
 ppo-u.5   7489422   protein REDUCED CHLOROPLAST COVERAGE 2 
 ppo-u.5   7465978   protein REDUCED CHLOROPLAST COVERAGE 2 
 mtr-u.5   112418287   protein TSS 
 sly-u.5   101252601   protein REDUCED CHLOROPLAST COVERAGE 2 
 osa-u.5   4328917   protein REDUCED CHLOROPLAST COVERAGE 2 

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Top 50 coexpressed genes to 100257033 (vvi-u.5 coexpression data)

 KEGG ID   Pathway name   #genes in coex list   #genes in genome   -log10(p)   Link to the KEGG* map 
(Multiple genes)

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Top 50 enrichment test to 100257033 (vvi-u.5 coexpression data)

CoexMap"100257033"


vviLOC100257033 | Entrez gene ID : 100257033      
Species vvi ath gma ppo mtr sly osa bdi hvu bra cit bna sbi ghi sot nta cre tae zma
Paralog 3 1 2 2 1 1 1 0 0 0 0 0 0 0 0 0 0 0 0
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CoexMap
Chloroplast
Nucleus

functional annotation
KEGG
GO BP
GO:0006996 [list] [network] organelle organization  (751 genes)  IEA  
GO CC
GO:0005737 [list] [network] cytoplasm  (4496 genes)  IEA  
GO MF
GO:0005515 [list] [network] protein binding  (4232 genes)  IEA  
Protein XP_059596765.1 [sequence] [blastp]
Subcellular
localization
wolf
nucl 6,  cyto 2,  cysk 1  (predict for XP_059596765.1)
Subcellular
localization
TargetP
other 9  (predict for XP_059596765.1)
Gene expression
All samples [Expression pattern]
Tissue specificity*
Show Coexpressed Genes
Gene Function KEGG Entrez
Gene
ID		 Other ID Link Target Reference

vvi-u.5
for
100257033
vvi-r.5
for
100257033
vvi-m.5
for
100257033
ath-u.5
for
AT4G28080
gma-u.5
for
100806823
gma-u.5
for
100792534
ppo-u.5
for
7489422
ppo-u.5
for
7465978
mtr-u.5
for
112418287
sly-u.5
for
101252601
osa-u.5
for
4328917


Ortholog ID: 8105
Species vvi ath gma gma bra bra ppo ppo mtr ghi ghi bna bna cit sly sot nta nta osa tae tae hvu sbi bdi
Symbol LOC100257033 AT4G28080 LOC100806823 LOC100792534 LOC103861804 LOC103834776 LOC7489422 LOC7465978 LOC112418287 LOC107948399 LOC107899383 LOC106440974 LOC106414207 LOC102623823 LOC101252601 LOC102597930 LOC107776855 LOC107793365 LOC4328917 LOC123142700 LOC123145880 LOC123401197 LOC8081975 LOC100825002
Function* protein REDUCED CHLOROPLAST COVERAGE 2 Tetratricopeptide repeat (TPR)-like superfamily protein protein TSS protein TSS protein TSS protein TSS protein REDUCED CHLOROPLAST COVERAGE 2 protein REDUCED CHLOROPLAST COVERAGE 2 protein TSS protein TSS protein TSS protein REDUCED CHLOROPLAST COVERAGE 2 protein REDUCED CHLOROPLAST COVERAGE 2 protein REDUCED CHLOROPLAST COVERAGE 2 protein REDUCED CHLOROPLAST COVERAGE 2 protein TSS protein REDUCED CHLOROPLAST COVERAGE 2 protein REDUCED CHLOROPLAST COVERAGE 2 protein REDUCED CHLOROPLAST COVERAGE 2 protein TSS-like protein TSS protein TSS protein TSS protein TSS
Coexmap

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Coexpression

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KEGG Info
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
vvi00630 Glyoxylate and dicarboxylate metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ath00710 Carbon fixation by Calvin cycle 2
ath01200 Carbon metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma00710 Carbon fixation by Calvin cycle 2
gma01200 Carbon metabolism 2
gma00970 Aminoacyl-tRNA biosynthesis 2
gma00130 Ubiquinone and other terpenoid-quinone biosynthesis 2
gma01240 Biosynthesis of cofactors 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma00970 Aminoacyl-tRNA biosynthesis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bra00630 Glyoxylate and dicarboxylate metabolism 3
bra01200 Carbon metabolism 3
bra00710 Carbon fixation by Calvin cycle 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ppo01200 Carbon metabolism 8
ppo00710 Carbon fixation by Calvin cycle 7
ppo00010 Glycolysis / Gluconeogenesis 3
ppo00620 Pyruvate metabolism 3
ppo00195 Photosynthesis 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ppo00710 Carbon fixation by Calvin cycle 3
ppo01200 Carbon metabolism 3
ppo01230 Biosynthesis of amino acids 3
ppo00010 Glycolysis / Gluconeogenesis 2
ppo00860 Porphyrin metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
mtr00710 Carbon fixation by Calvin cycle 8
mtr01200 Carbon metabolism 8
mtr00630 Glyoxylate and dicarboxylate metabolism 6
mtr00500 Starch and sucrose metabolism 2
mtr00520 Amino sugar and nucleotide sugar metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi00230 Purine metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi00230 Purine metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sly04626 Plant-pathogen interaction 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae03010 Ribosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae03010 Ribosome 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sbi03010 Ribosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bdi00970 Aminoacyl-tRNA biosynthesis 4
Expression Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern
Entrez Gene ID* 100257033 828923 100806823 100792534 103861804 103834776 7489422 7465978 112418287 107948399 107899383 106440974 106414207 102623823 101252601 102597930 107776855 107793365 4328917 123142700 123145880 123401197 8081975 100825002
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