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Orthologous genes in OrthoFinder**

Species Gene Description
 nta-r.1   107793365   protein REDUCED CHLOROPLAST COVERAGE 2 
 nta-r.1   107776855   protein REDUCED CHLOROPLAST COVERAGE 2 
 sly-u.5   101252601   protein REDUCED CHLOROPLAST COVERAGE 2 
 sot-r.1   102597930   protein TSS 
 ath-u.5   AT4G28080   Tetratricopeptide repeat (TPR)-like superfamily protein 
 gma-u.5   100792534   protein TSS 
 gma-u.5   100806823   protein TSS 
 bra-r.6   103861804   protein TSS 
 bra-r.6   103834776   protein TSS 
 vvi-u.5   100257033   protein REDUCED CHLOROPLAST COVERAGE 2 
 ppo-u.5   7489422   protein REDUCED CHLOROPLAST COVERAGE 2 
 ppo-u.5   7465978   protein REDUCED CHLOROPLAST COVERAGE 2 
 mtr-u.5   112418287   protein TSS 
 ghi-r.1   107948399   protein TSS 
 ghi-r.1   107899383   protein TSS 
 bna-r.1   106440974   protein REDUCED CHLOROPLAST COVERAGE 2 
 bna-r.1   106414207   protein REDUCED CHLOROPLAST COVERAGE 2 
 bna-r.1   106409627   protein REDUCED CHLOROPLAST COVERAGE 2 
 cit-r.1   102623823   protein REDUCED CHLOROPLAST COVERAGE 2 
 osa-u.5   4328917   protein REDUCED CHLOROPLAST COVERAGE 2 
 tae-r.2   123145880   protein TSS 
 tae-r.2   123142700   protein TSS-like 
 tae-r.2   123139054   protein TSS 
 hvu-r.1   123401197   protein TSS 
 sbi-r.1   8081975   protein TSS 
 bdi-r.1   100825002   protein TSS 

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Top 50 coexpressed genes to 107793365 (nta-r.1 coexpression data)

 KEGG ID   Pathway name   #genes in coex list   #genes in genome   -log10(p)   Link to the KEGG* map 
(Multiple genes)

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Top 50 enrichment test to 107793365 (nta-r.1 coexpression data)

CoexMap"107793365"


ntaLOC107793365 | Entrez gene ID : 107793365      
Species nta sly sot ath gma bra vvi ppo mtr ghi bna cit osa tae hvu sbi bdi zma cre
Paralog 2 1 1 1 2 2 1 2 1 2 3 1 1 3 1 1 1 0 0
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CoexMap
Chloroplast
Nucleus

functional annotation
KEGG
GO BP
GO:0006996 [list] [network] organelle organization  (1641 genes)  IEA  
GO CC
GO:0005737 [list] [network] cytoplasm  (8458 genes)  IEA  
GO MF
GO:0005515 [list] [network] protein binding  (7685 genes)  IEA  
Protein XP_075077472.1 [sequence] [blastp]
XP_075077473.1 [sequence] [blastp]
XP_075077474.1 [sequence] [blastp]
Subcellular
localization
wolf
nucl 9,  chlo 1,  cysk 1  (predict for XP_075077472.1)
nucl 8,  chlo 1,  cyto 1,  cysk 1  (predict for XP_075077473.1)
nucl 4,  cyto 2,  nucl_plas 2,  chlo 1,  mito 1,  chlo_mito 1  (predict for XP_075077474.1)
Subcellular
localization
TargetP
other 8  (predict for XP_075077472.1)
other 8  (predict for XP_075077473.1)
other 6  (predict for XP_075077474.1)
Gene expression
All samples [Expression pattern]
Tissue specificity*
Show Coexpressed Genes
Gene Function KEGG Entrez
Gene
ID		 Other ID Link Target Reference

nta-r.1
for
107793365
nta-r.1
for
107776855
sly-u.5
for
101252601
sot-r.1
for
102597930
ath-u.5
for
AT4G28080
gma-u.5
for
100792534
gma-u.5
for
100806823
bra-r.6
for
103861804
bra-r.6
for
103834776
vvi-u.5
for
100257033
ppo-u.5
for
7489422
ppo-u.5
for
7465978
mtr-u.5
for
112418287
ghi-r.1
for
107948399
ghi-r.1
for
107899383
bna-r.1
for
106440974
bna-r.1
for
106414207
bna-r.1
for
106409627
cit-r.1
for
102623823
osa-u.5
for
4328917
tae-r.2
for
123145880
tae-r.2
for
123142700
tae-r.2
for
123139054
hvu-r.1
for
123401197
sbi-r.1
for
8081975
bdi-r.1
for
100825002


Ortholog ID: 8105
Species nta nta sly sot ath gma gma bra bra vvi ppo ppo mtr ghi ghi bna bna bna cit osa tae tae tae hvu sbi bdi
Symbol LOC107793365 LOC107776855 LOC101252601 LOC102597930 AT4G28080 LOC100792534 LOC100806823 LOC103861804 LOC103834776 LOC100257033 LOC7489422 LOC7465978 LOC112418287 LOC107948399 LOC107899383 LOC106440974 LOC106414207 LOC106409627 LOC102623823 LOC4328917 LOC123145880 LOC123142700 LOC123128742 LOC123401197 LOC8081975 LOC100825002
Function* protein REDUCED CHLOROPLAST COVERAGE 2 protein REDUCED CHLOROPLAST COVERAGE 2 protein REDUCED CHLOROPLAST COVERAGE 2 protein TSS Tetratricopeptide repeat (TPR)-like superfamily protein protein TSS protein TSS protein TSS protein TSS protein REDUCED CHLOROPLAST COVERAGE 2 protein REDUCED CHLOROPLAST COVERAGE 2 protein REDUCED CHLOROPLAST COVERAGE 2 protein TSS protein TSS protein TSS protein REDUCED CHLOROPLAST COVERAGE 2 protein REDUCED CHLOROPLAST COVERAGE 2 protein REDUCED CHLOROPLAST COVERAGE 2 protein REDUCED CHLOROPLAST COVERAGE 2 protein REDUCED CHLOROPLAST COVERAGE 2 protein TSS protein TSS-like protein TSS protein TSS protein TSS protein TSS
Coexmap

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Coexpression

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KEGG Info
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sly04626 Plant-pathogen interaction 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ath00710 Carbon fixation by Calvin cycle 2
ath01200 Carbon metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma00970 Aminoacyl-tRNA biosynthesis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma00710 Carbon fixation by Calvin cycle 2
gma01200 Carbon metabolism 2
gma00970 Aminoacyl-tRNA biosynthesis 2
gma00130 Ubiquinone and other terpenoid-quinone biosynthesis 2
gma01240 Biosynthesis of cofactors 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bra00630 Glyoxylate and dicarboxylate metabolism 3
bra01200 Carbon metabolism 3
bra00710 Carbon fixation by Calvin cycle 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
vvi00630 Glyoxylate and dicarboxylate metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ppo01200 Carbon metabolism 8
ppo00710 Carbon fixation by Calvin cycle 7
ppo00010 Glycolysis / Gluconeogenesis 3
ppo00620 Pyruvate metabolism 3
ppo00195 Photosynthesis 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ppo00710 Carbon fixation by Calvin cycle 3
ppo01200 Carbon metabolism 3
ppo01230 Biosynthesis of amino acids 3
ppo00010 Glycolysis / Gluconeogenesis 2
ppo00860 Porphyrin metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
mtr00710 Carbon fixation by Calvin cycle 8
mtr01200 Carbon metabolism 8
mtr00630 Glyoxylate and dicarboxylate metabolism 6
mtr00500 Starch and sucrose metabolism 2
mtr00520 Amino sugar and nucleotide sugar metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi00230 Purine metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi00230 Purine metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae03010 Ribosome 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae03010 Ribosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae03010 Ribosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sbi03010 Ribosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bdi00970 Aminoacyl-tRNA biosynthesis 4
Expression Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern
Entrez Gene ID* 107793365 107776855 101252601 102597930 828923 100792534 100806823 103861804 103834776 100257033 7489422 7465978 112418287 107948399 107899383 106440974 106414207 106409627 102623823 4328917 123145880 123142700 123128742 123401197 8081975 100825002
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