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Orthologous genes in OrthoFinder**

Species Gene Description
 sbi-r.1   8081975   protein TSS 
 osa-u.5   4328917   protein REDUCED CHLOROPLAST COVERAGE 2 
 ath-u.5   AT4G28080   Tetratricopeptide repeat (TPR)-like superfamily protein 
 gma-u.5   100806823   protein TSS 
 gma-u.5   100792534   protein TSS 
 sly-u.5   101252601   protein REDUCED CHLOROPLAST COVERAGE 2 
 vvi-u.5   100257033   protein REDUCED CHLOROPLAST COVERAGE 2 
 ppo-u.5   7489422   protein REDUCED CHLOROPLAST COVERAGE 2 
 ppo-u.5   7465978   protein REDUCED CHLOROPLAST COVERAGE 2 
 mtr-u.5   112418287   protein TSS 

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Top 50 coexpressed genes to 8081975 (sbi-r.1 coexpression data)

 KEGG ID   Pathway name   #genes in coex list   #genes in genome   -log10(p)   Link to the KEGG* map 
(Multiple genes)

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Top 50 enrichment test to 8081975 (sbi-r.1 coexpression data)

CoexMap"8081975"


sbiLOC8081975 | Entrez gene ID : 8081975    
Species sbi osa ath gma sly vvi ppo mtr bra nta cre hvu cit bdi sot zma tae bna ghi
Paralog 1 1 1 2 1 1 2 1 0 0 0 0 0 0 0 0 0 0 0
Show/Hide Columns:        



CoexMap
Chloroplast
Nucleus

functional annotation
KEGG
GO BP
GO:0006996 [list] [network] organelle organization  (854 genes)  IEA  
GO CC
GO:0005737 [list] [network] cytoplasm  (4816 genes)  IEA  
GO MF
GO:0005515 [list] [network] protein binding  (4172 genes)  IEA  
Protein XP_021314597.1 [sequence] [blastp]
Subcellular
localization
wolf
nucl 7,  cyto 1,  plas 1,  vacu 1,  E.R. 1,  E.R._vacu 1,  E.R._plas 1,  cyto_E.R. 1,  cyto_plas 1  (predict for XP_021314597.1)
Subcellular
localization
TargetP
other 8  (predict for XP_021314597.1)
Gene expression
All samples [Expression pattern]
Tissue specificity*
Show Coexpressed Genes
Gene Function KEGG Entrez
Gene
ID		 Other ID Link Target Reference

sbi-r.1
for
8081975

.
osa-u.5
for
4328917

.
ath-u.5
for
AT4G28080

.
gma-u.5
for
100806823

.
gma-u.5
for
100792534

.
sly-u.5
for
101252601

.
vvi-u.5
for
100257033

.
ppo-u.5
for
7489422

.
ppo-u.5
for
7465978

.
mtr-u.5
for
112418287

.


Ortholog ID: 8105
Species ath gma gma sly osa bra bra vvi ppo ppo mtr tae tae hvu ghi ghi bna bna sbi sot cit bdi nta nta
Symbol AT4G28080 LOC100806823 LOC100792534 LOC101252601 LOC4328917 LOC103861804 LOC103834776 LOC100257033 LOC7489422 LOC7465978 LOC112418287 LOC123142700 LOC123145880 LOC123401197 LOC107948399 LOC107899383 LOC106440974 LOC106414207 LOC8081975 LOC102597930 LOC102623823 LOC100825002 LOC107776855 LOC107793365
Function* Tetratricopeptide repeat (TPR)-like superfamily protein protein TSS protein TSS protein REDUCED CHLOROPLAST COVERAGE 2 protein REDUCED CHLOROPLAST COVERAGE 2 protein TSS protein TSS protein REDUCED CHLOROPLAST COVERAGE 2 protein REDUCED CHLOROPLAST COVERAGE 2 protein REDUCED CHLOROPLAST COVERAGE 2 protein TSS protein TSS-like protein TSS protein TSS protein TSS protein TSS protein REDUCED CHLOROPLAST COVERAGE 2 protein REDUCED CHLOROPLAST COVERAGE 2 protein TSS protein TSS protein REDUCED CHLOROPLAST COVERAGE 2 protein TSS protein REDUCED CHLOROPLAST COVERAGE 2 protein REDUCED CHLOROPLAST COVERAGE 2
Coexmap

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Coexpression

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KEGG Info
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ath00710 Carbon fixation by Calvin cycle 2
ath01200 Carbon metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma00710 Carbon fixation by Calvin cycle 2
gma01200 Carbon metabolism 2
gma00970 Aminoacyl-tRNA biosynthesis 2
gma00130 Ubiquinone and other terpenoid-quinone biosynthesis 2
gma01240 Biosynthesis of cofactors 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma00970 Aminoacyl-tRNA biosynthesis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sly04626 Plant-pathogen interaction 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bra00630 Glyoxylate and dicarboxylate metabolism 3
bra01200 Carbon metabolism 3
bra00710 Carbon fixation by Calvin cycle 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
vvi00630 Glyoxylate and dicarboxylate metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ppo01200 Carbon metabolism 8
ppo00710 Carbon fixation by Calvin cycle 7
ppo00010 Glycolysis / Gluconeogenesis 3
ppo00620 Pyruvate metabolism 3
ppo00195 Photosynthesis 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ppo00710 Carbon fixation by Calvin cycle 3
ppo01200 Carbon metabolism 3
ppo01230 Biosynthesis of amino acids 3
ppo00010 Glycolysis / Gluconeogenesis 2
ppo00860 Porphyrin metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
mtr00710 Carbon fixation by Calvin cycle 8
mtr01200 Carbon metabolism 8
mtr00630 Glyoxylate and dicarboxylate metabolism 6
mtr00500 Starch and sucrose metabolism 2
mtr00520 Amino sugar and nucleotide sugar metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae03010 Ribosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae03010 Ribosome 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi00230 Purine metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi00230 Purine metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sbi03010 Ribosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bdi00970 Aminoacyl-tRNA biosynthesis 4
Expression Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern
Entrez Gene ID* 828923 100806823 100792534 101252601 4328917 103861804 103834776 100257033 7489422 7465978 112418287 123142700 123145880 123401197 107948399 107899383 106440974 106414207 8081975 102597930 102623823 100825002 107776855 107793365
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