Select Species**


OK


Orthologous genes in OrthoFinder**

Species Gene Description
 vvi-u.5   100258344   pentatricopeptide repeat-containing protein At3g02330, mitochondrial 
 vvi-r.5   100258344   pentatricopeptide repeat-containing protein At3g02330, mitochondrial 
 ath-u.5   AT3G02330   Pentatricopeptide repeat (PPR) superfamily protein 
 ppo-u.5   18097650   pentatricopeptide repeat-containing protein At3g02330, mitochondrial 
 mtr-u.5   11430742   pentatricopeptide repeat-containing protein At3g02330, mitochondrial 
 ghi-r.1   107945771   pentatricopeptide repeat-containing protein At3g02330, mitochondrial 
 ghi-r.1   107916736   pentatricopeptide repeat-containing protein At3g02330, mitochondrial 
 cit-r.1   102624138   pentatricopeptide repeat-containing protein At3g02330, mitochondrial 
 sly-u.5   101264944   pentatricopeptide repeat-containing protein At3g02330, mitochondrial 
 sot-r.1   102589876   pentatricopeptide repeat-containing protein At3g02330 
 nta-r.1   107784296   pentatricopeptide repeat-containing protein At3g02330, mitochondrial-like 
 osa-u.5   4349362   pentatricopeptide repeat-containing protein At3g02330, mitochondrial 
 zma-u.5   103640719   pentatricopeptide repeat-containing protein 
 tae-r.2   123181551   pentatricopeptide repeat-containing protein At3g02330, mitochondrial 
 tae-r.2   123127243   pentatricopeptide repeat-containing protein At3g02330, mitochondrial 
 tae-r.2   123051306   pentatricopeptide repeat-containing protein At3g02330, mitochondrial 
 hvu-r.1   123437529   pentatricopeptide repeat-containing protein At3g02330, mitochondrial 
 sbi-r.1   8067177   pentatricopeptide repeat-containing protein At3g02330, mitochondrial 
 bdi-r.1   100836657   pentatricopeptide repeat-containing protein At3g02330, mitochondrial 

close


Top 50 coexpressed genes to 100258344 (vvi-u.5 coexpression data)

 KEGG ID   Pathway name   #genes in coex list   #genes in genome   -log10(p)   Link to the KEGG* map 
(Multiple genes)

close

close

Top 50 enrichment test to 100258344 (vvi-u.5 coexpression data)

CoexMap"100258344"


vviLOC100258344 | Entrez gene ID : 100258344    
Species vvi ath ppo mtr ghi cit sly sot nta osa zma tae hvu sbi bdi gma bra cre bna
Paralog 2 1 1 1 2 1 1 1 1 1 1 3 1 1 1 0 0 0 0
Show/Hide Columns:        



CoexMap
Chloroplast
Nucleus

functional annotation
KEGG
GO BP
GO:0009451 [list] [network] RNA modification  (500 genes)  IEA  
GO CC
GO MF
GO:0003723 [list] [network] RNA binding  (1286 genes)  IEA  
GO:0005515 [list] [network] protein binding  (4232 genes)  IEA  
Protein XP_002278668.2 [sequence] [blastp]
Subcellular
localization
wolf
chlo 6,  mito 3,  cyto_mito 2  (predict for XP_002278668.2)
Subcellular
localization
TargetP
chlo 5,  mito 3  (predict for XP_002278668.2)
Gene expression
All samples [Expression pattern]
Tissue specificity*
Show Coexpressed Genes
Gene Function KEGG Entrez
Gene
ID		 Other ID Link Target Reference

vvi-u.5
for
100258344
vvi-r.5
for
100258344
ath-u.5
for
AT3G02330
ppo-u.5
for
18097650
mtr-u.5
for
11430742
ghi-r.1
for
107945771
ghi-r.1
for
107916736
cit-r.1
for
102624138
sly-u.5
for
101264944
sot-r.1
for
102589876
nta-r.1
for
107784296
osa-u.5
for
4349362
zma-u.5
for
103640719
tae-r.2
for
123181551
tae-r.2
for
123127243
tae-r.2
for
123051306
hvu-r.1
for
123437529
sbi-r.1
for
8067177
bdi-r.1
for
100836657


Ortholog ID: 10777
Species vvi ath ppo mtr ghi ghi cit sly sot nta osa zma tae tae tae hvu sbi bdi
Symbol LOC100258344 AT3G02330 LOC18097650 LOC11430742 LOC107945771 LOC107916736 LOC102624138 LOC101264944 LOC102589876 LOC107784296 LOC4349362 LOC103640719 LOC123181551 LOC123127243 LOC123051306 LOC123437529 LOC8067177 LOC100836657
Function* pentatricopeptide repeat-containing protein At3g02330, mitochondrial Pentatricopeptide repeat (PPR) superfamily protein pentatricopeptide repeat-containing protein At3g02330, mitochondrial pentatricopeptide repeat-containing protein At3g02330, mitochondrial pentatricopeptide repeat-containing protein At3g02330, mitochondrial pentatricopeptide repeat-containing protein At3g02330, mitochondrial pentatricopeptide repeat-containing protein At3g02330, mitochondrial pentatricopeptide repeat-containing protein At3g02330, mitochondrial pentatricopeptide repeat-containing protein At3g02330 pentatricopeptide repeat-containing protein At3g02330, mitochondrial-like pentatricopeptide repeat-containing protein At3g02330, mitochondrial pentatricopeptide repeat-containing protein pentatricopeptide repeat-containing protein At3g02330, mitochondrial pentatricopeptide repeat-containing protein At3g02330, mitochondrial pentatricopeptide repeat-containing protein At3g02330, mitochondrial pentatricopeptide repeat-containing protein At3g02330, mitochondrial pentatricopeptide repeat-containing protein At3g02330, mitochondrial pentatricopeptide repeat-containing protein At3g02330, mitochondrial
Coexmap

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.
Coexpression

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.
KEGG Info
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta03008 Ribosome biogenesis in eukaryotes 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bdi03008 Ribosome biogenesis in eukaryotes 3
Expression Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern
Entrez Gene ID* 100258344 821115 18097650 11430742 107945771 107916736 102624138 101264944 102589876 107784296 4349362 103640719 123181551 123127243 123051306 123437529 8067177 100836657
The preparation time of this page was 0.4 [sec].