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Orthologous genes in OrthoFinder**

Species Gene Description
 bdi-r.1   100836657   pentatricopeptide repeat-containing protein At3g02330, mitochondrial 
 tae-r.2   123051306   pentatricopeptide repeat-containing protein At3g02330, mitochondrial 
 tae-r.2   123127243   pentatricopeptide repeat-containing protein At3g02330, mitochondrial 
 tae-r.2   123181551   pentatricopeptide repeat-containing protein At3g02330, mitochondrial 
 hvu-r.1   123437529   pentatricopeptide repeat-containing protein At3g02330, mitochondrial 
 osa-u.5   4349362   pentatricopeptide repeat-containing protein At3g02330, mitochondrial 
 zma-u.5   103640719   pentatricopeptide repeat-containing protein 
 sbi-r.1   8067177   pentatricopeptide repeat-containing protein At3g02330, mitochondrial 
 ath-u.5   AT3G02330   Pentatricopeptide repeat (PPR) superfamily protein 
 sly-u.5   101264944   pentatricopeptide repeat-containing protein At3g02330, mitochondrial 
 vvi-u.5   100258344   pentatricopeptide repeat-containing protein At3g02330, mitochondrial 
 ppo-u.5   18097650   pentatricopeptide repeat-containing protein At3g02330, mitochondrial 
 mtr-u.5   11430742   pentatricopeptide repeat-containing protein At3g02330, mitochondrial 
 ghi-r.1   107945771   pentatricopeptide repeat-containing protein At3g02330, mitochondrial 
 ghi-r.1   107916736   pentatricopeptide repeat-containing protein At3g02330, mitochondrial 
 sot-r.1   102589876   pentatricopeptide repeat-containing protein At3g02330 
 cit-r.1   102624138   pentatricopeptide repeat-containing protein At3g02330, mitochondrial 
 nta-r.1   107784296   pentatricopeptide repeat-containing protein At3g02330, mitochondrial-like 

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Top 50 coexpressed genes to 100836657 (bdi-r.1 coexpression data)

 KEGG ID   Pathway name   #genes in coex list   #genes in genome   -log10(p)   Link to the KEGG* map 
(Multiple genes)

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Top 50 enrichment test to 100836657 (bdi-r.1 coexpression data)

CoexMap"100836657"


bdiLOC100836657 | Entrez gene ID : 100836657    
Species bdi tae hvu osa zma sbi ath sly vvi ppo mtr ghi sot cit nta gma bna cre bra
Paralog 1 3 1 1 1 1 1 1 1 1 1 2 1 1 1 0 0 0 0
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CoexMap
Chloroplast
Nucleus

functional annotation
KEGG
GO BP
GO:0009451 [list] [network] RNA modification  (384 genes)  IEA  
GO CC
GO MF
GO:0003723 [list] [network] RNA binding  (1239 genes)  IEA  
GO:0005515 [list] [network] protein binding  (4040 genes)  IEA  
Protein XP_024316705.1 [sequence] [blastp]
XP_024316706.1 [sequence] [blastp]
XP_024316708.1 [sequence] [blastp]
XP_024316709.1 [sequence] [blastp]
Subcellular
localization
wolf
chlo 7,  mito 3  (predict for XP_024316705.1)
chlo 7,  mito 3  (predict for XP_024316706.1)
chlo 7,  mito 3  (predict for XP_024316708.1)
chlo 7,  mito 3  (predict for XP_024316709.1)
Subcellular
localization
TargetP
mito 6,  chlo 5  (predict for XP_024316705.1)
mito 6,  chlo 5  (predict for XP_024316706.1)
mito 6,  chlo 5  (predict for XP_024316708.1)
mito 6,  chlo 5  (predict for XP_024316709.1)
Gene expression
All samples [Expression pattern]
Tissue specificity*
Show Coexpressed Genes
Gene Function KEGG Entrez
Gene
ID		 Other ID Link Target Reference

bdi-r.1
for
100836657
tae-r.2
for
123051306
tae-r.2
for
123127243
tae-r.2
for
123181551
hvu-r.1
for
123437529
osa-u.5
for
4349362
zma-u.5
for
103640719
sbi-r.1
for
8067177
ath-u.5
for
AT3G02330
sly-u.5
for
101264944
vvi-u.5
for
100258344
ppo-u.5
for
18097650
mtr-u.5
for
11430742
ghi-r.1
for
107945771
ghi-r.1
for
107916736
sot-r.1
for
102589876
cit-r.1
for
102624138
nta-r.1
for
107784296


Ortholog ID: 10777
Species bdi tae tae tae hvu osa zma sbi ath sly vvi ppo mtr ghi ghi sot cit nta
Symbol LOC100836657 LOC123051306 LOC123127243 LOC123181551 LOC123437529 LOC4349362 LOC103640719 LOC8067177 AT3G02330 LOC101264944 LOC100258344 LOC18097650 LOC11430742 LOC107945771 LOC107916736 LOC102589876 LOC102624138 LOC107784296
Function* pentatricopeptide repeat-containing protein At3g02330, mitochondrial pentatricopeptide repeat-containing protein At3g02330, mitochondrial pentatricopeptide repeat-containing protein At3g02330, mitochondrial pentatricopeptide repeat-containing protein At3g02330, mitochondrial pentatricopeptide repeat-containing protein At3g02330, mitochondrial pentatricopeptide repeat-containing protein At3g02330, mitochondrial pentatricopeptide repeat-containing protein pentatricopeptide repeat-containing protein At3g02330, mitochondrial Pentatricopeptide repeat (PPR) superfamily protein pentatricopeptide repeat-containing protein At3g02330, mitochondrial pentatricopeptide repeat-containing protein At3g02330, mitochondrial pentatricopeptide repeat-containing protein At3g02330, mitochondrial pentatricopeptide repeat-containing protein At3g02330, mitochondrial pentatricopeptide repeat-containing protein At3g02330, mitochondrial pentatricopeptide repeat-containing protein At3g02330, mitochondrial pentatricopeptide repeat-containing protein At3g02330 pentatricopeptide repeat-containing protein At3g02330, mitochondrial pentatricopeptide repeat-containing protein At3g02330, mitochondrial-like
Coexmap

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Coexpression

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KEGG Info
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bdi03008 Ribosome biogenesis in eukaryotes 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta03008 Ribosome biogenesis in eukaryotes 4
Expression Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern
Entrez Gene ID* 100836657 123051306 123127243 123181551 123437529 4349362 103640719 8067177 821115 101264944 100258344 18097650 11430742 107945771 107916736 102589876 102624138 107784296
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