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Orthologous genes in OrthoFinder**

Species Gene Description
 sot-r.1  102589876  pentatricopeptide repeat-containing protein At3g02330 
 sly-u.5  101264944  pentatricopeptide repeat-containing protein At3g02330, mitochondrial 
 ath-u.5  AT3G02330  Pentatricopeptide repeat (PPR) superfamily protein 
 vvi-u.5  100258344  pentatricopeptide repeat-containing protein At3g02330, mitochondrial 
 ppo-u.5  18097650  pentatricopeptide repeat-containing protein At3g02330, mitochondrial 
 mtr-u.5  11430742  pentatricopeptide repeat-containing protein At3g02330, mitochondrial 
 osa-u.5  4349362  pentatricopeptide repeat-containing protein At3g02330, mitochondrial 
 zma-u.5  103640719  pentatricopeptide repeat-containing protein 

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Top 50 coexpressed genes to 102589876 (sot-r.1 coexpression data)

 KEGG ID   Pathway name   #genes in coex list   #genes in genome   -log10(p)   Link to the KEGG* map 
(Multiple genes)

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Top 50 enrichment test to 102589876 (sot-r.1 coexpression data)

CoexMap"102589876"


sotLOC102589876 | Entrez gene ID : 102589876
Species sot sly ath vvi ppo mtr osa zma sbi nta bra cre hvu cit bdi tae bna ghi gma
Paralog 1 1 1 1 1 1 1 1 0 0 0 0 0 0 0 0 0 0 0
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CoexMap
Chloroplast
Nucleus

functional annotation
KEGG
GO BP
GO:0009451 [list] [network] RNA modification  (378 genes)  IEA  
GO CC
GO MF
GO:0003723 [list] [network] RNA binding  (1335 genes)  IEA  
GO:0005515 [list] [network] protein binding  (4214 genes)  IEA  
Protein XP_006366808.1 [sequence] [blastp]
Subcellular
localization
wolf
chlo 9,  mito 1  (predict for XP_006366808.1)
Subcellular
localization
TargetP
mito 7  (predict for XP_006366808.1)
Gene expression
All samples [Expression pattern]
Tissue specificity*
Show Coexpressed Genes
Gene Function KEGG Entrez
Gene
ID
Other ID Link Target Reference

sot-r.1
for
102589876

.

sly-u.5
for
101264944

.

ath-u.5
for
AT3G02330

.

vvi-u.5
for
100258344

.

ppo-u.5
for
18097650

.

mtr-u.5
for
11430742

.

osa-u.5
for
4349362

.

zma-u.5
for
103640719

.


Ortholog ID: 10777
Species ath sly osa zma vvi ppo mtr tae tae hvu ghi ghi sbi sot cit bdi nta
Symbol AT3G02330 LOC101264944 LOC4349362 LOC103640719 LOC100258344 LOC18097650 LOC11430742 LOC123051306 LOC123127243 LOC123437529 LOC107945771 LOC107916736 LOC8067177 LOC102589876 LOC102624138 LOC100836657 LOC107784296
Function* Pentatricopeptide repeat (PPR) superfamily protein pentatricopeptide repeat-containing protein At3g02330, mitochondrial pentatricopeptide repeat-containing protein At3g02330, mitochondrial pentatricopeptide repeat-containing protein pentatricopeptide repeat-containing protein At3g02330, mitochondrial pentatricopeptide repeat-containing protein At3g02330, mitochondrial pentatricopeptide repeat-containing protein At3g02330, mitochondrial pentatricopeptide repeat-containing protein At3g02330, mitochondrial pentatricopeptide repeat-containing protein At3g02330, mitochondrial pentatricopeptide repeat-containing protein At3g02330, mitochondrial pentatricopeptide repeat-containing protein At3g02330, mitochondrial pentatricopeptide repeat-containing protein At3g02330, mitochondrial pentatricopeptide repeat-containing protein At3g02330, mitochondrial pentatricopeptide repeat-containing protein At3g02330 pentatricopeptide repeat-containing protein At3g02330, mitochondrial pentatricopeptide repeat-containing protein At3g02330, mitochondrial pentatricopeptide repeat-containing protein At3g02330, mitochondrial-like
Coexmap

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Coexpression

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KEGG Info
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bdi03008 Ribosome biogenesis in eukaryotes 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta03008 Ribosome biogenesis in eukaryotes 4
Expression Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern
Entrez Gene ID* 821115 101264944 4349362 103640719 100258344 18097650 11430742 123051306 123127243 123437529 107945771 107916736 8067177 102589876 102624138 100836657 107784296
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