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Orthologous genes in OrthoFinder**

Species Gene Description
 vvi-u.5   100258504   putative E3 ubiquitin-protein ligase LIN-2 
 vvi-r.5   100258504   putative E3 ubiquitin-protein ligase LIN-2 
 ath-u.5   AT3G06880   Transducin/WD40 repeat-like superfamily protein 
 gma-u.5   100782870   putative E3 ubiquitin-protein ligase LIN-1 
 gma-u.5   100789287   putative E3 ubiquitin-protein ligase LIN-1 
 ppo-u.5   18101809   putative E3 ubiquitin-protein ligase LIN-1 
 mtr-u.5   25488113   putative E3 ubiquitin-protein ligase LIN-1 
 sly-u.5   101256034   putative E3 ubiquitin-protein ligase LIN-1 
 osa-u.5   4338548   putative E3 ubiquitin-protein ligase LIN-1 
 zma-u.5   103630225   putative E3 ubiquitin-protein ligase LIN-1 

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Top 50 coexpressed genes to 100258504 (vvi-u.5 coexpression data)

 KEGG ID   Pathway name   #genes in coex list   #genes in genome   -log10(p)   Link to the KEGG* map 
(Multiple genes)

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Top 50 enrichment test to 100258504 (vvi-u.5 coexpression data)

CoexMap"100258504"


vviLOC100258504 | Entrez gene ID : 100258504    
Species vvi ath gma ppo mtr sly osa zma bdi hvu bra cit bna sbi ghi sot nta cre tae
Paralog 2 1 2 1 1 1 1 1 0 0 0 0 0 0 0 0 0 0 0
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CoexMap
Chloroplast
Nucleus

functional annotation
KEGG
GO BP
GO CC
GO MF
GO:0005515 [list] [network] protein binding  (4232 genes)  IEA  
Protein XP_002269707.2 [sequence] [blastp]
XP_010649586.1 [sequence] [blastp]
XP_019075751.1 [sequence] [blastp]
Subcellular
localization
wolf
nucl 6,  cysk 1,  plas 1,  pero 1,  golg 1,  golg_plas 1  (predict for XP_002269707.2)
nucl 6,  cysk 1,  plas 1,  pero 1,  golg 1,  golg_plas 1  (predict for XP_010649586.1)
nucl 6,  cysk 1,  plas 1,  pero 1,  golg 1,  golg_plas 1  (predict for XP_019075751.1)
Subcellular
localization
TargetP
chlo 7,  other 3  (predict for XP_002269707.2)
chlo 7,  other 3  (predict for XP_010649586.1)
chlo 7,  other 3  (predict for XP_019075751.1)
Gene expression
All samples [Expression pattern]
Tissue specificity*
Show Coexpressed Genes
Gene Function KEGG Entrez
Gene
ID		 Other ID Link Target Reference

vvi-u.5
for
100258504
vvi-r.5
for
100258504
ath-u.5
for
AT3G06880
gma-u.5
for
100782870
gma-u.5
for
100789287
ppo-u.5
for
18101809
mtr-u.5
for
25488113
sly-u.5
for
101256034
osa-u.5
for
4338548
zma-u.5
for
103630225


Ortholog ID: 9453
Species vvi ath gma gma bra ppo mtr ghi ghi bna bna cit sly sot nta nta osa zma tae tae hvu sbi bdi
Symbol LOC100258504 AT3G06880 LOC100782870 LOC100789287 LOC103859188 LOC18101809 LOC25488113 LOC107931484 LOC107935153 LOC106389025 LOC106388928 LOC102611723 LOC101256034 LOC102584479 LOC107814463 LOC107798703 LOC4338548 LOC103630225 LOC123053222 LOC123181776 LOC123408014 LOC8077901 LOC100827665
Function* putative E3 ubiquitin-protein ligase LIN-2 Transducin/WD40 repeat-like superfamily protein putative E3 ubiquitin-protein ligase LIN-1 putative E3 ubiquitin-protein ligase LIN-1 putative E3 ubiquitin-protein ligase LIN-1 putative E3 ubiquitin-protein ligase LIN-1 putative E3 ubiquitin-protein ligase LIN-1 putative E3 ubiquitin-protein ligase LIN-1 putative E3 ubiquitin-protein ligase LIN-1 putative E3 ubiquitin-protein ligase LIN-1 putative E3 ubiquitin-protein ligase LIN-1 putative E3 ubiquitin-protein ligase LIN-1 putative E3 ubiquitin-protein ligase LIN-1 putative E3 ubiquitin-protein ligase LIN putative E3 ubiquitin-protein ligase LIN-1 putative E3 ubiquitin-protein ligase LIN-1 putative E3 ubiquitin-protein ligase LIN-1 putative E3 ubiquitin-protein ligase LIN-1 putative E3 ubiquitin-protein ligase LIN-1 putative E3 ubiquitin-protein ligase LIN-1 uncharacterized LOC123408014 putative E3 ubiquitin-protein ligase LIN-1 putative E3 ubiquitin-protein ligase LIN-1
Coexmap

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Coexpression

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KEGG Info
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma04814 Motor proteins 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta00270 Cysteine and methionine metabolism 2
nta04814 Motor proteins 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta00270 Cysteine and methionine metabolism 3
nta04814 Motor proteins 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae00073 Cutin, suberine and wax biosynthesis 5
tae04146 Peroxisome 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae00073 Cutin, suberine and wax biosynthesis 6
tae04146 Peroxisome 3
tae00010 Glycolysis / Gluconeogenesis 3
tae00071 Fatty acid degradation 3
tae00350 Tyrosine metabolism 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sbi04814 Motor proteins 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bdi00591 Linoleic acid metabolism 2
bdi00592 alpha-Linolenic acid metabolism 2
Expression Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern
Entrez Gene ID* 100258504 819873 100782870 100789287 103859188 18101809 25488113 107931484 107935153 106389025 106388928 102611723 101256034 102584479 107814463 107798703 4338548 103630225 123053222 123181776 123408014 8077901 100827665
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