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Orthologous genes in OrthoFinder**

Species Gene Description
 ppo-u.5   18101809   putative E3 ubiquitin-protein ligase LIN-1 
 ppo-r.4   18101809   putative E3 ubiquitin-protein ligase LIN-1 
 gma-u.5   100782870   putative E3 ubiquitin-protein ligase LIN-1 
 gma-u.5   100789287   putative E3 ubiquitin-protein ligase LIN-1 
 mtr-u.5   25488113   putative E3 ubiquitin-protein ligase LIN-1 
 ath-u.5   AT3G06880   Transducin/WD40 repeat-like superfamily protein 
 vvi-u.5   100258504   putative E3 ubiquitin-protein ligase LIN-2 
 sly-u.5   101256034   putative E3 ubiquitin-protein ligase LIN-1 
 osa-u.5   4338548   putative E3 ubiquitin-protein ligase LIN-1 
 zma-u.5   103630225   putative E3 ubiquitin-protein ligase LIN-1 

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Top 50 coexpressed genes to 18101809 (ppo-u.5 coexpression data)

 KEGG ID   Pathway name   #genes in coex list   #genes in genome   -log10(p)   Link to the KEGG* map 
(Multiple genes)

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Top 50 enrichment test to 18101809 (ppo-u.5 coexpression data)

CoexMap"18101809"


ppoLOC18101809 | Entrez gene ID : 18101809    
Species ppo gma mtr ath vvi sly osa zma sbi nta bra cre hvu cit bdi sot tae bna ghi
Paralog 2 2 1 1 1 1 1 1 0 0 0 0 0 0 0 0 0 0 0
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CoexMap
Chloroplast
Nucleus

functional annotation
KEGG
GO BP
GO CC
GO MF
GO:0005515 [list] [network] protein binding  (4916 genes)  IEA  
Protein XP_024462156.1 [sequence] [blastp]
Subcellular
localization
wolf
nucl 2,  chlo 2,  cysk_nucl 1,  extr 1,  E.R. 1,  chlo_mito 1  (predict for XP_024462156.1)
Subcellular
localization
TargetP
other 8  (predict for XP_024462156.1)
Gene expression
All samples [Expression pattern]
Tissue specificity*
Show Coexpressed Genes
Gene Function KEGG Entrez
Gene
ID		 Other ID Link Target Reference

ppo-u.5
for
18101809

.
ppo-r.4
for
18101809

.
gma-u.5
for
100782870

.
gma-u.5
for
100789287

.
mtr-u.5
for
25488113

.
ath-u.5
for
AT3G06880

.
vvi-u.5
for
100258504

.
sly-u.5
for
101256034

.
osa-u.5
for
4338548

.
zma-u.5
for
103630225

.


Ortholog ID: 9453
Species ath gma gma sly osa zma bra vvi ppo mtr tae tae hvu ghi ghi bna bna sbi sot cit bdi nta nta
Symbol AT3G06880 LOC100782870 LOC100789287 LOC101256034 LOC4338548 LOC103630225 LOC103859188 LOC100258504 LOC18101809 LOC25488113 LOC123053222 LOC123181776 LOC123408014 LOC107931484 LOC107935153 LOC106389025 LOC106388928 LOC8077901 LOC102584479 LOC102611723 LOC100827665 LOC107814463 LOC107798703
Function* Transducin/WD40 repeat-like superfamily protein putative E3 ubiquitin-protein ligase LIN-1 putative E3 ubiquitin-protein ligase LIN-1 putative E3 ubiquitin-protein ligase LIN-1 putative E3 ubiquitin-protein ligase LIN-1 putative E3 ubiquitin-protein ligase LIN-1 putative E3 ubiquitin-protein ligase LIN-1 putative E3 ubiquitin-protein ligase LIN-2 putative E3 ubiquitin-protein ligase LIN-1 putative E3 ubiquitin-protein ligase LIN-1 putative E3 ubiquitin-protein ligase LIN-1 putative E3 ubiquitin-protein ligase LIN-1 uncharacterized LOC123408014 putative E3 ubiquitin-protein ligase LIN-1 putative E3 ubiquitin-protein ligase LIN-1 putative E3 ubiquitin-protein ligase LIN-1 putative E3 ubiquitin-protein ligase LIN-1 putative E3 ubiquitin-protein ligase LIN-1 putative E3 ubiquitin-protein ligase LIN putative E3 ubiquitin-protein ligase LIN-1 putative E3 ubiquitin-protein ligase LIN-1 putative E3 ubiquitin-protein ligase LIN-1 putative E3 ubiquitin-protein ligase LIN-1
Coexmap

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Coexpression

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KEGG Info
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma04814 Motor proteins 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae00073 Cutin, suberine and wax biosynthesis 5
tae04146 Peroxisome 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae00073 Cutin, suberine and wax biosynthesis 6
tae04146 Peroxisome 3
tae00010 Glycolysis / Gluconeogenesis 3
tae00071 Fatty acid degradation 3
tae00350 Tyrosine metabolism 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sbi04814 Motor proteins 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bdi00591 Linoleic acid metabolism 2
bdi00592 alpha-Linolenic acid metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta00270 Cysteine and methionine metabolism 2
nta04814 Motor proteins 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta00270 Cysteine and methionine metabolism 3
nta04814 Motor proteins 2
Expression Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern
Entrez Gene ID* 819873 100782870 100789287 101256034 4338548 103630225 103859188 100258504 18101809 25488113 123053222 123181776 123408014 107931484 107935153 106389025 106388928 8077901 102584479 102611723 100827665 107814463 107798703
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