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Orthologous genes in OrthoFinder**

Species Gene Description
 vvi-u.5   100258796   uncharacterized LOC100258796 
 vvi-r.5   100258796   uncharacterized LOC100258796 
 vvi-m.5   100258796   uncharacterized LOC100258796 
 ath-u.5   AT5G20220   zinc knuckle (CCHC-type) family protein 
 gma-u.5   100800156   uncharacterized LOC100800156 
 ppo-u.5   7459042   uncharacterized LOC7459042 
 mtr-u.5   25502759   uncharacterized LOC25502759 
 sly-u.5   101258258   uncharacterized LOC101258258 
 osa-u.5   4325947   branchpoint-bridging protein 
 zma-u.5   100217244   uncharacterized LOC100217244 

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Top 50 coexpressed genes to 100258796 (vvi-u.5 coexpression data)

 KEGG ID   Pathway name   #genes in coex list   #genes in genome   -log10(p)   Link to the KEGG* map 
(Multiple genes)

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Top 50 enrichment test to 100258796 (vvi-u.5 coexpression data)

CoexMap"100258796"


vviLOC100258796 | Entrez gene ID : 100258796      
Species vvi ath gma ppo mtr sly osa zma bdi hvu bra cit bna sbi ghi sot nta cre tae
Paralog 3 1 1 1 1 1 1 1 0 0 0 0 0 0 0 0 0 0 0
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CoexMap
Chloroplast
Nucleus

functional annotation
KEGG
GO BP
GO:2000767 [list] [network] positive regulation of cytoplasmic translation  (1 genes)  IEA  
GO CC
GO:0005737 [list] [network] cytoplasm  (4496 genes)  IEA  
GO MF
GO:0045182 [list] [network] translation regulator activity  (2 genes)  IEA  
GO:0003727 [list] [network] single-stranded RNA binding  (10 genes)  IEA  
GO:0003729 [list] [network] mRNA binding  (233 genes)  IEA  
GO:0008270 [list] [network] zinc ion binding  (811 genes)  IEA  
Protein XP_002270296.1 [sequence] [blastp]
Subcellular
localization
wolf
chlo 6,  nucl 2,  mito 1,  nucl_plas 1  (predict for XP_002270296.1)
Subcellular
localization
TargetP
mito 5  (predict for XP_002270296.1)
Gene expression
All samples [Expression pattern]
Tissue specificity*
Show Coexpressed Genes
Gene Function KEGG Entrez
Gene
ID		 Other ID Link Target Reference

vvi-u.5
for
100258796
vvi-r.5
for
100258796
vvi-m.5
for
100258796
ath-u.5
for
AT5G20220
gma-u.5
for
100800156
ppo-u.5
for
7459042
mtr-u.5
for
25502759
sly-u.5
for
101258258
osa-u.5
for
4325947
zma-u.5
for
100217244


Ortholog ID: 11418
Species vvi ath gma bra ppo mtr ghi ghi bna bna cit sly sot nta nta osa zma tae tae hvu sbi bdi
Symbol LOC100258796 AT5G20220 LOC100800156 LOC103845699 LOC7459042 LOC25502759 LOC107894080 LOC107918477 LOC106439486 LOC106371770 LOC102610409 LOC101258258 LOC102599958 LOC107778021 LOC107796219 LOC4325947 LOC100217244 LOC123070359 LOC123078808 LOC123444267 LOC8069791 LOC100823164
Function* uncharacterized LOC100258796 zinc knuckle (CCHC-type) family protein uncharacterized LOC100800156 uncharacterized LOC103845699 uncharacterized LOC7459042 uncharacterized LOC25502759 zinc finger CCHC domain-containing protein 9 zinc finger CCHC domain-containing protein 9 uncharacterized LOC106439486 uncharacterized LOC106371770 uncharacterized LOC102610409 uncharacterized LOC101258258 uncharacterized LOC102599958 uncharacterized LOC107778021 uncharacterized LOC107796219 branchpoint-bridging protein uncharacterized LOC100217244 uncharacterized LOC123070359 zinc finger CCHC domain-containing protein 9 uncharacterized LOC123444267 zinc finger CCHC domain-containing protein 9 uncharacterized LOC100823164
Coexmap

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Coexpression

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KEGG Info
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma03060 Protein export 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
mtr00710 Carbon fixation by Calvin cycle 6
mtr01200 Carbon metabolism 6
mtr03010 Ribosome 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi00073 Cutin, suberine and wax biosynthesis 2
ghi00561 Glycerolipid metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi00561 Glycerolipid metabolism 4
ghi00073 Cutin, suberine and wax biosynthesis 2
ghi00010 Glycolysis / Gluconeogenesis 2
ghi00040 Pentose and glucuronate interconversions 2
ghi00053 Ascorbate and aldarate metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cit03015 mRNA surveillance pathway 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sot00195 Photosynthesis 5
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta00860 Porphyrin metabolism 2
nta00630 Glyoxylate and dicarboxylate metabolism 2
nta00670 One carbon pool by folate 2
nta00195 Photosynthesis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta00195 Photosynthesis 3
nta00906 Carotenoid biosynthesis 2
nta00630 Glyoxylate and dicarboxylate metabolism 2
nta00670 One carbon pool by folate 2
Expression Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern
Entrez Gene ID* 100258796 832144 100800156 103845699 7459042 25502759 107894080 107918477 106439486 106371770 102610409 101258258 102599958 107778021 107796219 4325947 100217244 123070359 123078808 123444267 8069791 100823164
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