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Orthologous genes in OrthoFinder**

Species Gene Description
 ghi-r.1   107894080   zinc finger CCHC domain-containing protein 9 
 ath-u.5   AT5G20220   zinc knuckle (CCHC-type) family protein 
 gma-u.5   100800156   uncharacterized LOC100800156 
 vvi-u.5   100258796   uncharacterized LOC100258796 
 ppo-u.5   7459042   uncharacterized LOC7459042 
 mtr-u.5   25502759   uncharacterized LOC25502759 
 sly-u.5   101258258   uncharacterized LOC101258258 
 osa-u.5   4325947   branchpoint-bridging protein 
 zma-u.5   100217244   uncharacterized LOC100217244 

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Top 50 coexpressed genes to 107894080 (ghi-r.1 coexpression data)

 KEGG ID   Pathway name   #genes in coex list   #genes in genome   -log10(p)   Link to the KEGG* map 
(Multiple genes)

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Top 50 enrichment test to 107894080 (ghi-r.1 coexpression data)

CoexMap"107894080"


ghiLOC107894080 | Entrez gene ID : 107894080    
Species ghi ath gma vvi ppo mtr sly osa zma hvu bna cit bra sbi bdi nta tae cre sot
Paralog 1 1 1 1 1 1 1 1 1 0 0 0 0 0 0 0 0 0 0
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CoexMap
Chloroplast
Nucleus

functional annotation
KEGG
GO BP
GO:2000767 [list] [network] positive regulation of cytoplasmic translation  (3 genes)  IEA  
GO CC
GO:0005737 [list] [network] cytoplasm  (13864 genes)  IEA  
GO MF
GO:0045182 [list] [network] translation regulator activity  (9 genes)  IEA  
GO:0003727 [list] [network] single-stranded RNA binding  (70 genes)  IEA  
GO:0003729 [list] [network] mRNA binding  (890 genes)  IEA  
GO:0008270 [list] [network] zinc ion binding  (1753 genes)  IEA  
Protein XP_016674778.2 [sequence] [blastp]
XP_016674779.2 [sequence] [blastp]
XP_040940929.1 [sequence] [blastp]
Subcellular
localization
wolf
nucl 5,  chlo 1,  extr 1,  cyto 1,  vacu 1,  pero 1,  chlo_mito 1,  cyto_pero 1  (predict for XP_016674778.2)
nucl 5,  chlo 1,  extr 1,  cyto 1,  vacu 1,  pero 1,  chlo_mito 1,  cyto_pero 1  (predict for XP_016674779.2)
nucl 5,  chlo 1,  extr 1,  cyto 1,  vacu 1,  pero 1,  chlo_mito 1,  cyto_pero 1  (predict for XP_040940929.1)
Subcellular
localization
TargetP
chlo 2  (predict for XP_016674778.2)
chlo 2  (predict for XP_016674779.2)
chlo 2  (predict for XP_040940929.1)
Gene expression
All samples [Expression pattern]
Tissue specificity*
Show Coexpressed Genes
Gene Function KEGG Entrez
Gene
ID		 Other ID Link Target Reference

ghi-r.1
for
107894080
ath-u.5
for
AT5G20220
gma-u.5
for
100800156
vvi-u.5
for
100258796
ppo-u.5
for
7459042
mtr-u.5
for
25502759
sly-u.5
for
101258258
osa-u.5
for
4325947
zma-u.5
for
100217244


Ortholog ID: 11418
Species ghi ghi ath bra bna bna cit gma vvi ppo mtr sly sot nta nta osa zma tae tae hvu sbi bdi
Symbol LOC107894080 LOC107918477 AT5G20220 LOC103845699 LOC106439486 LOC106371770 LOC102610409 LOC100800156 LOC100258796 LOC7459042 LOC25502759 LOC101258258 LOC102599958 LOC107778021 LOC107796219 LOC4325947 LOC100217244 LOC123070359 LOC123078808 LOC123444267 LOC8069791 LOC100823164
Function* zinc finger CCHC domain-containing protein 9 zinc finger CCHC domain-containing protein 9 zinc knuckle (CCHC-type) family protein uncharacterized LOC103845699 uncharacterized LOC106439486 uncharacterized LOC106371770 uncharacterized LOC102610409 uncharacterized LOC100800156 uncharacterized LOC100258796 uncharacterized LOC7459042 uncharacterized LOC25502759 uncharacterized LOC101258258 uncharacterized LOC102599958 uncharacterized LOC107778021 uncharacterized LOC107796219 branchpoint-bridging protein uncharacterized LOC100217244 uncharacterized LOC123070359 zinc finger CCHC domain-containing protein 9 uncharacterized LOC123444267 zinc finger CCHC domain-containing protein 9 uncharacterized LOC100823164
Coexmap

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Coexpression

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KEGG Info
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi00073 Cutin, suberine and wax biosynthesis 2
ghi00561 Glycerolipid metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi00561 Glycerolipid metabolism 4
ghi00073 Cutin, suberine and wax biosynthesis 2
ghi00010 Glycolysis / Gluconeogenesis 2
ghi00040 Pentose and glucuronate interconversions 2
ghi00053 Ascorbate and aldarate metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cit03015 mRNA surveillance pathway 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma03060 Protein export 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
mtr00710 Carbon fixation by Calvin cycle 6
mtr01200 Carbon metabolism 6
mtr03010 Ribosome 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sot00195 Photosynthesis 5
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta00860 Porphyrin metabolism 2
nta00630 Glyoxylate and dicarboxylate metabolism 2
nta00670 One carbon pool by folate 2
nta00195 Photosynthesis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta00195 Photosynthesis 3
nta00906 Carotenoid biosynthesis 2
nta00630 Glyoxylate and dicarboxylate metabolism 2
nta00670 One carbon pool by folate 2
Expression Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern
Entrez Gene ID* 107894080 107918477 832144 103845699 106439486 106371770 102610409 100800156 100258796 7459042 25502759 101258258 102599958 107778021 107796219 4325947 100217244 123070359 123078808 123444267 8069791 100823164
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