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Orthologous genes in OrthoFinder**

Species Gene Description
 ppo-u.5   7459042   uncharacterized LOC7459042 
 ppo-r.4   7459042   uncharacterized LOC7459042 
 ppo-m.4   7459042   uncharacterized LOC7459042 
 gma-u.5   100800156   uncharacterized LOC100800156 
 mtr-u.5   25502759   uncharacterized LOC25502759 
 ath-u.5   AT5G20220   zinc knuckle (CCHC-type) family protein 
 vvi-u.5   100258796   uncharacterized LOC100258796 
 sly-u.5   101258258   uncharacterized LOC101258258 
 osa-u.5   4325947   branchpoint-bridging protein 
 zma-u.5   100217244   uncharacterized LOC100217244 

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Top 50 coexpressed genes to 7459042 (ppo-u.5 coexpression data)

 KEGG ID   Pathway name   #genes in coex list   #genes in genome   -log10(p)   Link to the KEGG* map 
(Multiple genes)

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Top 50 enrichment test to 7459042 (ppo-u.5 coexpression data)

CoexMap"7459042"


ppoLOC7459042 | Entrez gene ID : 7459042    
Species ppo gma mtr ath vvi sly osa zma sbi nta bra cre hvu cit bdi sot tae bna ghi
Paralog 3 1 1 1 1 1 1 1 0 0 0 0 0 0 0 0 0 0 0
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CoexMap
Chloroplast
Nucleus

functional annotation
KEGG
GO BP
GO:2000767 [list] [network] positive regulation of cytoplasmic translation  (1 genes)  IEA  
GO CC
GO:0005737 [list] [network] cytoplasm  (6111 genes)  IEA  
GO MF
GO:0045182 [list] [network] translation regulator activity  (3 genes)  IEA  
GO:0003727 [list] [network] single-stranded RNA binding  (18 genes)  IEA  
GO:0003729 [list] [network] mRNA binding  (348 genes)  IEA  
GO:0008270 [list] [network] zinc ion binding  (777 genes)  IEA  
Protein XP_002314720.2 [sequence] [blastp]
XP_024465468.1 [sequence] [blastp]
Subcellular
localization
wolf
nucl 8,  chlo 2  (predict for XP_002314720.2)
nucl 9,  chlo 1  (predict for XP_024465468.1)
Subcellular
localization
TargetP
other 3  (predict for XP_002314720.2)
other 3  (predict for XP_024465468.1)
Gene expression
All samples [Expression pattern]
Tissue specificity*
Show Coexpressed Genes
Gene Function KEGG Entrez
Gene
ID		 Other ID Link Target Reference

ppo-u.5
for
7459042

.
ppo-r.4
for
7459042

.
ppo-m.4
for
7459042

.
gma-u.5
for
100800156

.
mtr-u.5
for
25502759

.
ath-u.5
for
AT5G20220

.
vvi-u.5
for
100258796

.
sly-u.5
for
101258258

.
osa-u.5
for
4325947

.
zma-u.5
for
100217244

.


Ortholog ID: 11418
Species ath gma sly osa zma bra vvi ppo mtr tae tae hvu ghi ghi bna bna sbi sot cit bdi nta nta
Symbol AT5G20220 LOC100800156 LOC101258258 LOC4325947 LOC100217244 LOC103845699 LOC100258796 LOC7459042 LOC25502759 LOC123070359 LOC123078808 LOC123444267 LOC107894080 LOC107918477 LOC106439486 LOC106371770 LOC8069791 LOC102599958 LOC102610409 LOC100823164 LOC107778021 LOC107796219
Function* zinc knuckle (CCHC-type) family protein uncharacterized LOC100800156 uncharacterized LOC101258258 branchpoint-bridging protein uncharacterized LOC100217244 uncharacterized LOC103845699 uncharacterized LOC100258796 uncharacterized LOC7459042 uncharacterized LOC25502759 uncharacterized LOC123070359 zinc finger CCHC domain-containing protein 9 uncharacterized LOC123444267 zinc finger CCHC domain-containing protein 9 zinc finger CCHC domain-containing protein 9 uncharacterized LOC106439486 uncharacterized LOC106371770 zinc finger CCHC domain-containing protein 9 uncharacterized LOC102599958 uncharacterized LOC102610409 uncharacterized LOC100823164 uncharacterized LOC107778021 uncharacterized LOC107796219
Coexmap

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Coexpression

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KEGG Info
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma03060 Protein export 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
mtr00710 Carbon fixation by Calvin cycle 6
mtr01200 Carbon metabolism 6
mtr03010 Ribosome 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi00073 Cutin, suberine and wax biosynthesis 2
ghi00561 Glycerolipid metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi00561 Glycerolipid metabolism 4
ghi00073 Cutin, suberine and wax biosynthesis 2
ghi00010 Glycolysis / Gluconeogenesis 2
ghi00040 Pentose and glucuronate interconversions 2
ghi00053 Ascorbate and aldarate metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sot00195 Photosynthesis 5
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cit03015 mRNA surveillance pathway 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta00860 Porphyrin metabolism 2
nta00630 Glyoxylate and dicarboxylate metabolism 2
nta00670 One carbon pool by folate 2
nta00195 Photosynthesis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta00195 Photosynthesis 3
nta00906 Carotenoid biosynthesis 2
nta00630 Glyoxylate and dicarboxylate metabolism 2
nta00670 One carbon pool by folate 2
Expression Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern
Entrez Gene ID* 832144 100800156 101258258 4325947 100217244 103845699 100258796 7459042 25502759 123070359 123078808 123444267 107894080 107918477 106439486 106371770 8069791 102599958 102610409 100823164 107778021 107796219
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