Select Species**


OK


Orthologous genes in OrthoFinder**

Species Gene Description
 vvi-u.5   100262452   thymidine kinase 
 vvi-r.5   100262452   thymidine kinase 
 ath-u.5   AT4G16470   Tetratricopeptide repeat (TPR)-like superfamily protein 
 sly-u.5   101260595   thymidine kinase a-like 
 osa-u.5   4341572   pentatricopeptide repeat-containing protein At4g16470 

close


Top 50 coexpressed genes to 100262452 (vvi-u.5 coexpression data)

 KEGG ID   Pathway name   #genes in coex list   #genes in genome   -log10(p)   Link to the KEGG* map 
(Multiple genes)

close

close

Top 50 enrichment test to 100262452 (vvi-u.5 coexpression data)

CoexMap"100262452"


vviLOC100262452 | Entrez gene ID : 100262452    
Species vvi ath sly osa sbi nta mtr cre bra cit hvu ppo bdi sot zma tae bna ghi gma
Paralog 2 1 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
Show/Hide Columns:        



CoexMap
Chloroplast
Nucleus

functional annotation
KEGG vvi00240 [list] [network] Pyrimidine metabolism (60 genes)
vvi01232 [list] [network] Nucleotide metabolism (75 genes)
GO BP
GO:0046104 [list] [network] thymidine metabolic process  (2 genes)  IEA  
GO:0009451 [list] [network] RNA modification  (500 genes)  IEA  
GO CC
GO MF
GO:0004797 [list] [network] thymidine kinase activity  (2 genes)  IEA  
GO:0003723 [list] [network] RNA binding  (1286 genes)  IEA  
GO:0005524 [list] [network] ATP binding  (2120 genes)  IEA  
GO:0005515 [list] [network] protein binding  (4232 genes)  IEA  
Protein XP_002266298.3 [sequence] [blastp]
XP_010647234.2 [sequence] [blastp]
XP_010647235.1 [sequence] [blastp]
Subcellular
localization
wolf
chlo 8,  mito 2  (predict for XP_002266298.3)
chlo 9,  mito 1  (predict for XP_010647234.2)
cyto 6,  pero 2,  nucl 1,  golg 1  (predict for XP_010647235.1)
Subcellular
localization
TargetP
chlo 7  (predict for XP_002266298.3)
chlo 6  (predict for XP_010647234.2)
scret 8,  other 3  (predict for XP_010647235.1)
Gene expression
All samples [Expression pattern]
Tissue specificity*
Show Coexpressed Genes
Gene Function KEGG Entrez
Gene
ID		 Other ID Link Target Reference

vvi-u.5
for
100262452

.
vvi-r.5
for
100262452

.
ath-u.5
for
AT4G16470

.
sly-u.5
for
101260595

.
osa-u.5
for
4341572

.


Ortholog ID: 11984
Species ath sly osa bra vvi ghi ghi bna bna cit nta nta
Symbol AT4G16470 LOC101260595 LOC4341572 LOC103869554 LOC100262452 LOC107901819 LOC107962084 LOC106446359 LOC106421982 LOC102621433 LOC107804258 LOC107807865
Function* Tetratricopeptide repeat (TPR)-like superfamily protein thymidine kinase a-like pentatricopeptide repeat-containing protein At4g16470 pentatricopeptide repeat-containing protein At4g16470 thymidine kinase pentatricopeptide repeat-containing protein At4g16470 pentatricopeptide repeat-containing protein At4g16470 pentatricopeptide repeat-containing protein At4g16470 pentatricopeptide repeat-containing protein At4g16470-like thymidine kinase a pentatricopeptide repeat-containing protein At4g16470-like uncharacterized LOC107807865
Coexmap

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.
Coexpression

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.
KEGG Info
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
osa00480 Glutathione metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
vvi03040 Spliceosome 3
vvi03020 RNA polymerase 2
vvi03420 Nucleotide excision repair 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi00195 Photosynthesis 2
ghi04141 Protein processing in endoplasmic reticulum 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna03018 RNA degradation 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna03018 RNA degradation 2
bna00564 Glycerophospholipid metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta03010 Ribosome 3
nta03008 Ribosome biogenesis in eukaryotes 2
Expression Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern
Entrez Gene ID* 827345 101260595 4341572 103869554 100262452 107901819 107962084 106446359 106421982 102621433 107804258 107807865
The preparation time of this page was 0.1 [sec].