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Orthologous genes in OrthoFinder**

Species Gene Description
 sly-u.5   101260595   thymidine kinase a-like 
 sly-r.6   101260595   thymidine kinase a-like 
 ath-u.5   AT4G16470   Tetratricopeptide repeat (TPR)-like superfamily protein 
 vvi-u.5   100262452   thymidine kinase 
 osa-u.5   4341572   pentatricopeptide repeat-containing protein At4g16470 

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Top 50 coexpressed genes to 101260595 (sly-u.5 coexpression data)

 KEGG ID   Pathway name   #genes in coex list   #genes in genome   -log10(p)   Link to the KEGG* map 
(Multiple genes)

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Top 50 enrichment test to 101260595 (sly-u.5 coexpression data)

CoexMap"101260595"


slyLOC101260595 | Entrez gene ID : 101260595    
Species sly ath vvi osa ppo hvu mtr sot tae nta bra cit gma zma ghi bdi bna sbi cre
Paralog 2 1 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
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CoexMap
Chloroplast
Nucleus

functional annotation
KEGG sly00240 [list] [network] Pyrimidine metabolism (66 genes)
sly01232 [list] [network] Nucleotide metabolism (84 genes)
GO BP
GO:0046104 [list] [network] thymidine metabolic process  (2 genes)  IEA  
GO CC
GO MF
GO:0004797 [list] [network] thymidine kinase activity  (2 genes)  IEA  
GO:0005524 [list] [network] ATP binding  (1916 genes)  IEA  
GO:0005515 [list] [network] protein binding  (3982 genes)  IEA  
Protein XP_004250280.1 [sequence] [blastp]
XP_019066686.1 [sequence] [blastp]
Subcellular
localization
wolf
chlo 9,  mito 1  (predict for XP_004250280.1)
chlo 7,  mito 3  (predict for XP_019066686.1)
Subcellular
localization
TargetP
mito 4  (predict for XP_004250280.1)
mito 4  (predict for XP_019066686.1)
Gene expression
All samples [Expression pattern]
Tissue specificity*
Show Coexpressed Genes
Gene Function KEGG Entrez
Gene
ID		 Other ID Link Target Reference

sly-u.5
for
101260595

.
sly-r.6
for
101260595

.
ath-u.5
for
AT4G16470

.
vvi-u.5
for
100262452

.
osa-u.5
for
4341572

.


Ortholog ID: 11984
Species ath sly osa bra vvi ghi ghi bna bna cit nta nta
Symbol AT4G16470 LOC101260595 LOC4341572 LOC103869554 LOC100262452 LOC107901819 LOC107962084 LOC106446359 LOC106421982 LOC102621433 LOC107804258 LOC107807865
Function* Tetratricopeptide repeat (TPR)-like superfamily protein thymidine kinase a-like pentatricopeptide repeat-containing protein At4g16470 pentatricopeptide repeat-containing protein At4g16470 thymidine kinase pentatricopeptide repeat-containing protein At4g16470 pentatricopeptide repeat-containing protein At4g16470 pentatricopeptide repeat-containing protein At4g16470 pentatricopeptide repeat-containing protein At4g16470-like thymidine kinase a pentatricopeptide repeat-containing protein At4g16470-like uncharacterized LOC107807865
Coexmap

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Coexpression

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KEGG Info
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
osa00480 Glutathione metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
vvi03040 Spliceosome 3
vvi03020 RNA polymerase 2
vvi03420 Nucleotide excision repair 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi00195 Photosynthesis 2
ghi04141 Protein processing in endoplasmic reticulum 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna03018 RNA degradation 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna03018 RNA degradation 2
bna00564 Glycerophospholipid metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta03010 Ribosome 3
nta03008 Ribosome biogenesis in eukaryotes 2
Expression Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern
Entrez Gene ID* 827345 101260595 4341572 103869554 100262452 107901819 107962084 106446359 106421982 102621433 107804258 107807865
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