ATTED-II : GeneCoexpression result

Species	Gene	Description
vvi-u.5	100264761	protein SLOW WALKER 1
vvi-r.5	100264761	protein SLOW WALKER 1
ath-u.5	SWA1	transducin family protein / WD-40 repeat family protein
gma-u.5	102668105	protein SLOW WALKER 1
gma-u.5	100806066	protein SLOW WALKER 1
ppo-u.5	7458238	protein SLOW WALKER 1
ppo-u.5	7457974	protein SLOW WALKER 1
mtr-u.5	11420033	protein SLOW WALKER 1
sly-u.5	101251776	protein SLOW WALKER 1
osa-u.5	4342750	protein SLOW WALKER 1
zma-u.5	100284315	small nucleolar ribonucleoprotein complex subunit

functional annotation

KEGG

vvi03008 [list] [network] Ribosome biogenesis in eukaryotes (287 genes)

GO BP

GO:0045943 [list] [network] positive regulation of transcription by RNA polymerase I	(3 genes)	IEA
GO:0006364 [list] [network] rRNA processing	(198 genes)	IEA

GO CC

GO:0005730 [list] [network] nucleolus

(170 genes)

IEA

GO MF

GO:0005515 [list] [network] protein binding

(4232 genes)

IEA

Protein

XP_002270535.1 [sequence] [blastp]

Subcellular
localization
wolf

nucl 4, chlo 2, cyto 2, nucl_plas 2

(predict for XP_002270535.1)

Subcellular
localization
TargetP

chlo 7, other 3

(predict for XP_002270535.1)

Gene expression

All samples

[Expression pattern]

Tissue specificity^*

	Gene	Function	KEGG					Entrez Gene ID	Other ID	Link	Target		Reference
	Gene	Function	KEGG					Entrez Gene ID	Other ID	Link	vvi-u.5 for 100264761	vvi-r.5 for 100264761	ath-u.5 for SWA1	gma-u.5 for 102668105	gma-u.5 for 100806066	ppo-u.5 for 7458238	ppo-u.5 for 7457974	mtr-u.5 for 11420033	sly-u.5 for 101251776	osa-u.5 for 4342750	zma-u.5 for 100284315

Ortholog ID: 8924

Species

vvi

ath

gma

bra

ppo

mtr

ghi

bna

cit

sly

sot

nta

osa

zma

tae

hvu

sbi

bdi

cre

Symbol

SWA1

Function^*

protein SLOW WALKER 1

transducin family protein / WD-40 repeat family protein

protein SLOW WALKER 1

protein SLOW WALKER 1-like

protein SLOW WALKER 1

protein SLOW WALKER 1-like

protein SLOW WALKER 1

small nucleolar ribonucleoprotein complex subunit

protein SLOW WALKER 1

uncharacterized protein

Coexmap

Please wait a moment.

Coexpression

Please wait a moment.

KEGG Info

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
vvi03008	Ribosome biogenesis in eukaryotes	3

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
ath03008	Ribosome biogenesis in eukaryotes	6

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
gma03008	Ribosome biogenesis in eukaryotes	7
gma00970	Aminoacyl-tRNA biosynthesis	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
gma03008	Ribosome biogenesis in eukaryotes	5

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
ppo03008	Ribosome biogenesis in eukaryotes	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
ppo03008	Ribosome biogenesis in eukaryotes	8

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
mtr03008	Ribosome biogenesis in eukaryotes	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
ghi00860	Porphyrin metabolism	2
ghi00900	Terpenoid backbone biosynthesis	2
ghi03008	Ribosome biogenesis in eukaryotes	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
ghi03008	Ribosome biogenesis in eukaryotes	3
ghi00860	Porphyrin metabolism	2
ghi00900	Terpenoid backbone biosynthesis	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
bna03010	Ribosome	2
bna03008	Ribosome biogenesis in eukaryotes	2
bna00240	Pyrimidine metabolism	2
bna01232	Nucleotide metabolism	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
bna03008	Ribosome biogenesis in eukaryotes	2
bna00240	Pyrimidine metabolism	2
bna01232	Nucleotide metabolism	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
cit03008	Ribosome biogenesis in eukaryotes	6

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
sly03008	Ribosome biogenesis in eukaryotes	5

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
sot03008	Ribosome biogenesis in eukaryotes	6

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
nta03008	Ribosome biogenesis in eukaryotes	3
nta03430	Mismatch repair	2
nta03460	Fanconi anemia pathway	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
nta03008	Ribosome biogenesis in eukaryotes	3
nta03430	Mismatch repair	2
nta03460	Fanconi anemia pathway	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
osa03008	Ribosome biogenesis in eukaryotes	8

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
zma03008	Ribosome biogenesis in eukaryotes	6

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
tae03008	Ribosome biogenesis in eukaryotes	6

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
tae03008	Ribosome biogenesis in eukaryotes	6

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
hvu03008	Ribosome biogenesis in eukaryotes	5
hvu03010	Ribosome	3

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
sbi03008	Ribosome biogenesis in eukaryotes	4
sbi03010	Ribosome	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
bdi03008	Ribosome biogenesis in eukaryotes	4

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
cre03008	Ribosome biogenesis in eukaryotes	7

Expression

Expression pattern

Entrez Gene ID^*

100264761

819411

102668105

100806066

103855657

7457974

7458238

11420033

107953196

107949876

106426399

106427723

102621396

101251776

102603390

107800862

107788893

4342750

100284315

123160359

123149655

123407750

110437405

100824522

5718769

Select Species^**

Orthologous genes in OrthoFinder^**

Top 50 coexpressed genes to 100264761 (vvi-u.5 coexpression data)

Top 50 enrichment test to 100264761 (vvi-u.5 coexpression data)


Species	vvi	ath	gma	ppo	mtr	sly	osa	zma	bdi	hvu	bra	cit	bna	sbi	ghi	sot	nta	cre	tae
Paralog	2	1	2	2	1	1	1	1	0	0	0	0	0	0	0	0	0	0	0

Select Species**

Orthologous genes in OrthoFinder**

Top 50 coexpressed genes to 100264761 (vvi-u.5 coexpression data)

Top 50 enrichment test to 100264761 (vvi-u.5 coexpression data)

Select Species^**

Orthologous genes in OrthoFinder^**