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Orthologous genes in OrthoFinder**

Species Gene Description
 cit-r.1   102621396   protein SLOW WALKER 1 
 ath-u.5   SWA1   transducin family protein / WD-40 repeat family protein 
 bra-r.6   103855657   protein SLOW WALKER 1 
 ghi-r.1   107953196   protein SLOW WALKER 1 
 ghi-r.1   107949876   protein SLOW WALKER 1 
 bna-r.1   106427723   protein SLOW WALKER 1 
 bna-r.1   106426399   protein SLOW WALKER 1-like 
 gma-u.5   102668105   protein SLOW WALKER 1 
 gma-u.5   100806066   protein SLOW WALKER 1 
 vvi-u.5   100264761   protein SLOW WALKER 1 
 ppo-u.5   7458238   protein SLOW WALKER 1 
 ppo-u.5   7457974   protein SLOW WALKER 1 
 mtr-u.5   11420033   protein SLOW WALKER 1 
 sly-u.5   101251776   protein SLOW WALKER 1 
 sot-r.1   102603390   protein SLOW WALKER 1 
 nta-r.1   107800862   protein SLOW WALKER 1-like 
 nta-r.1   107788893   protein SLOW WALKER 1 
 nta-r.1   107761795   protein SLOW WALKER 1 
 osa-u.5   4342750   protein SLOW WALKER 1 
 zma-u.5   100284315   small nucleolar ribonucleoprotein complex subunit 
 tae-r.2   123170430   protein SLOW WALKER 1 
 tae-r.2   123160359   protein SLOW WALKER 1 
 tae-r.2   123149655   protein SLOW WALKER 1 
 hvu-r.1   123407750   protein SLOW WALKER 1 
 sbi-r.1   110437405   protein SLOW WALKER 1 
 bdi-r.1   100824522   protein SLOW WALKER 1 
 cre-r.1   CHLRE_03g196850v5   uncharacterized protein 

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Top 50 coexpressed genes to 102621396 (cit-r.1 coexpression data)

 KEGG ID   Pathway name   #genes in coex list   #genes in genome   -log10(p)   Link to the KEGG* map 
(Multiple genes)

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Top 50 enrichment test to 102621396 (cit-r.1 coexpression data)

CoexMap"102621396"


citLOC102621396 | Entrez gene ID : 102621396      
Species cit ath bra ghi bna gma vvi ppo mtr sly sot nta osa zma tae hvu sbi bdi cre
Paralog 1 1 1 2 2 2 1 2 1 1 1 3 1 1 3 1 1 1 1
Show/Hide Columns:        



CoexMap
Chloroplast
Nucleus

functional annotation
KEGG cit03008 [list] [network] Ribosome biogenesis in eukaryotes (557 genes)
GO BP
GO:0045943 [list] [network] positive regulation of transcription by RNA polymerase I  (3 genes)  IEA  
GO:0006364 [list] [network] rRNA processing  (179 genes)  IEA  
GO CC
GO:0005730 [list] [network] nucleolus  (164 genes)  IEA  
GO MF
GO:0005515 [list] [network] protein binding  (3939 genes)  IEA  
Protein XP_006479841.1 [sequence] [blastp]
Subcellular
localization
wolf
chlo 4,  nucl 4,  cyto 1  (predict for XP_006479841.1)
Subcellular
localization
TargetP
chlo 8,  other 4  (predict for XP_006479841.1)
Gene expression
All samples [Expression pattern]
Tissue specificity*
Show Coexpressed Genes
Gene Function KEGG Entrez
Gene
ID		 Other ID Link Target Reference

cit-r.1
for
102621396
ath-u.5
for
SWA1
bra-r.6
for
103855657
ghi-r.1
for
107953196
ghi-r.1
for
107949876
bna-r.1
for
106427723
bna-r.1
for
106426399
gma-u.5
for
102668105
gma-u.5
for
100806066
vvi-u.5
for
100264761
ppo-u.5
for
7458238
ppo-u.5
for
7457974
mtr-u.5
for
11420033
sly-u.5
for
101251776
sot-r.1
for
102603390
nta-r.1
for
107800862
nta-r.1
for
107788893
nta-r.1
for
107761795
osa-u.5
for
4342750
zma-u.5
for
100284315
tae-r.2
for
123170430
tae-r.2
for
123160359
tae-r.2
for
123149655
hvu-r.1
for
123407750
sbi-r.1
for
110437405
bdi-r.1
for
100824522
cre-r.1
for
CHLRE_03g196850v5


Ortholog ID: 8924
Species cit ath bra ghi ghi bna bna gma gma vvi ppo ppo mtr sly sot nta nta nta osa zma tae tae tae hvu sbi bdi cre
Symbol LOC102621396 SWA1 LOC103855657 LOC107953196 LOC107949876 LOC106427723 LOC106426399 LOC102668105 LOC100806066 LOC100264761 LOC7458238 LOC7457974 LOC11420033 LOC101251776 LOC102603390 LOC107800862 LOC107788893 LOC107761795 LOC4342750 LOC100284315 LOC123170430 LOC123160359 LOC123149655 LOC123407750 LOC110437405 LOC100824522 CHLRE_03g196850v5
Function* protein SLOW WALKER 1 transducin family protein / WD-40 repeat family protein protein SLOW WALKER 1 protein SLOW WALKER 1 protein SLOW WALKER 1 protein SLOW WALKER 1 protein SLOW WALKER 1-like protein SLOW WALKER 1 protein SLOW WALKER 1 protein SLOW WALKER 1 protein SLOW WALKER 1 protein SLOW WALKER 1 protein SLOW WALKER 1 protein SLOW WALKER 1 protein SLOW WALKER 1 protein SLOW WALKER 1-like protein SLOW WALKER 1 protein SLOW WALKER 1 protein SLOW WALKER 1 small nucleolar ribonucleoprotein complex subunit protein SLOW WALKER 1 protein SLOW WALKER 1 protein SLOW WALKER 1 protein SLOW WALKER 1 protein SLOW WALKER 1 protein SLOW WALKER 1 uncharacterized protein
Coexmap

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Coexpression

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KEGG Info
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cit03008 Ribosome biogenesis in eukaryotes 6
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ath03008 Ribosome biogenesis in eukaryotes 6
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi00860 Porphyrin metabolism 2
ghi00900 Terpenoid backbone biosynthesis 2
ghi03008 Ribosome biogenesis in eukaryotes 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi03008 Ribosome biogenesis in eukaryotes 3
ghi00860 Porphyrin metabolism 2
ghi00900 Terpenoid backbone biosynthesis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna03008 Ribosome biogenesis in eukaryotes 2
bna00240 Pyrimidine metabolism 2
bna01232 Nucleotide metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna03010 Ribosome 2
bna03008 Ribosome biogenesis in eukaryotes 2
bna00240 Pyrimidine metabolism 2
bna01232 Nucleotide metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma03008 Ribosome biogenesis in eukaryotes 7
gma00970 Aminoacyl-tRNA biosynthesis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma03008 Ribosome biogenesis in eukaryotes 5
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
vvi03008 Ribosome biogenesis in eukaryotes 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ppo03008 Ribosome biogenesis in eukaryotes 8
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ppo03008 Ribosome biogenesis in eukaryotes 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
mtr03008 Ribosome biogenesis in eukaryotes 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sly03008 Ribosome biogenesis in eukaryotes 5
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sot03008 Ribosome biogenesis in eukaryotes 6
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta03008 Ribosome biogenesis in eukaryotes 3
nta03430 Mismatch repair 2
nta03460 Fanconi anemia pathway 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta03008 Ribosome biogenesis in eukaryotes 3
nta03430 Mismatch repair 2
nta03460 Fanconi anemia pathway 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta03008 Ribosome biogenesis in eukaryotes 3
nta03430 Mismatch repair 2
nta03460 Fanconi anemia pathway 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
osa03008 Ribosome biogenesis in eukaryotes 8
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
zma03008 Ribosome biogenesis in eukaryotes 6
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae03008 Ribosome biogenesis in eukaryotes 6
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae03008 Ribosome biogenesis in eukaryotes 6
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae03008 Ribosome biogenesis in eukaryotes 6
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
hvu03008 Ribosome biogenesis in eukaryotes 5
hvu03010 Ribosome 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sbi03008 Ribosome biogenesis in eukaryotes 4
sbi03010 Ribosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bdi03008 Ribosome biogenesis in eukaryotes 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cre03008 Ribosome biogenesis in eukaryotes 7
Expression Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern
Entrez Gene ID* 102621396 819411 103855657 107953196 107949876 106427723 106426399 102668105 100806066 100264761 7458238 7457974 11420033 101251776 102603390 107800862 107788893 107761795 4342750 100284315 123170430 123160359 123149655 123407750 110437405 100824522 5718769
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