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Orthologous genes in OrthoFinder**

Species Gene Description
 ppo-u.5   7457974   protein SLOW WALKER 1 
 ppo-r.4   7457974   protein SLOW WALKER 1 
 ppo-m.4   7457974   protein SLOW WALKER 1 
 ppo-u.5   7458238   protein SLOW WALKER 1 
 gma-u.5   102668105   protein SLOW WALKER 1 
 gma-u.5   100806066   protein SLOW WALKER 1 
 mtr-u.5   11420033   protein SLOW WALKER 1 
 ath-u.5   SWA1   transducin family protein / WD-40 repeat family protein 
 vvi-u.5   100264761   protein SLOW WALKER 1 
 sly-u.5   101251776   protein SLOW WALKER 1 
 osa-u.5   4342750   protein SLOW WALKER 1 
 zma-u.5   100284315   small nucleolar ribonucleoprotein complex subunit 

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Top 50 coexpressed genes to 7457974 (ppo-u.5 coexpression data)

 KEGG ID   Pathway name   #genes in coex list   #genes in genome   -log10(p)   Link to the KEGG* map 
(Multiple genes)

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Top 50 enrichment test to 7457974 (ppo-u.5 coexpression data)

CoexMap"7457974"


ppoLOC7457974 | Entrez gene ID : 7457974    
Species ppo gma mtr ath vvi sly osa zma sbi nta bra cre hvu cit bdi sot tae bna ghi
Paralog 4 2 1 1 1 1 1 1 0 0 0 0 0 0 0 0 0 0 0
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CoexMap
Chloroplast
Nucleus

functional annotation
KEGG pop03008 [list] [network] Ribosome biogenesis in eukaryotes (334 genes)
GO BP
GO:0045943 [list] [network] positive regulation of transcription by RNA polymerase I  (4 genes)  IEA  
GO:0006364 [list] [network] rRNA processing  (232 genes)  IEA  
GO CC
GO:0005730 [list] [network] nucleolus  (220 genes)  IEA  
GO MF
GO:0005515 [list] [network] protein binding  (4916 genes)  IEA  
Protein XP_002321043.1 [sequence] [blastp]
Subcellular
localization
wolf
nucl 4,  cyto 3,  chlo 2,  nucl_plas 2  (predict for XP_002321043.1)
Subcellular
localization
TargetP
other 8,  chlo 4  (predict for XP_002321043.1)
Gene expression
All samples [Expression pattern]
Tissue specificity*
Show Coexpressed Genes
Gene Function KEGG Entrez
Gene
ID		 Other ID Link Target Reference

ppo-u.5
for
7457974

.
ppo-r.4
for
7457974

.
ppo-m.4
for
7457974

.
ppo-u.5
for
7458238

.
gma-u.5
for
102668105

.
gma-u.5
for
100806066

.
mtr-u.5
for
11420033

.
ath-u.5
for
SWA1

.
vvi-u.5
for
100264761

.
sly-u.5
for
101251776

.
osa-u.5
for
4342750

.
zma-u.5
for
100284315

.


Ortholog ID: 8924
Species ath gma gma sly osa zma bra vvi ppo ppo mtr tae tae hvu ghi ghi bna bna cre sbi sot cit bdi nta nta
Symbol SWA1 LOC102668105 LOC100806066 LOC101251776 LOC4342750 LOC100284315 LOC103855657 LOC100264761 LOC7457974 LOC7458238 LOC11420033 LOC123160359 LOC123149655 LOC123407750 LOC107953196 LOC107949876 LOC106426399 LOC106427723 CHLRE_03g196850v5 LOC110437405 LOC102603390 LOC102621396 LOC100824522 LOC107800862 LOC107788893
Function* transducin family protein / WD-40 repeat family protein protein SLOW WALKER 1 protein SLOW WALKER 1 protein SLOW WALKER 1 protein SLOW WALKER 1 small nucleolar ribonucleoprotein complex subunit protein SLOW WALKER 1 protein SLOW WALKER 1 protein SLOW WALKER 1 protein SLOW WALKER 1 protein SLOW WALKER 1 protein SLOW WALKER 1 protein SLOW WALKER 1 protein SLOW WALKER 1 protein SLOW WALKER 1 protein SLOW WALKER 1 protein SLOW WALKER 1-like protein SLOW WALKER 1 uncharacterized protein protein SLOW WALKER 1 protein SLOW WALKER 1 protein SLOW WALKER 1 protein SLOW WALKER 1 protein SLOW WALKER 1-like protein SLOW WALKER 1
Coexmap

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Coexpression

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KEGG Info
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ath03008 Ribosome biogenesis in eukaryotes 6
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma03008 Ribosome biogenesis in eukaryotes 7
gma00970 Aminoacyl-tRNA biosynthesis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma03008 Ribosome biogenesis in eukaryotes 5
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sly03008 Ribosome biogenesis in eukaryotes 5
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
osa03008 Ribosome biogenesis in eukaryotes 8
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
zma03008 Ribosome biogenesis in eukaryotes 6
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
vvi03008 Ribosome biogenesis in eukaryotes 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ppo03008 Ribosome biogenesis in eukaryotes 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ppo03008 Ribosome biogenesis in eukaryotes 8
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
mtr03008 Ribosome biogenesis in eukaryotes 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae03008 Ribosome biogenesis in eukaryotes 6
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae03008 Ribosome biogenesis in eukaryotes 6
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
hvu03008 Ribosome biogenesis in eukaryotes 5
hvu03010 Ribosome 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi00860 Porphyrin metabolism 2
ghi00900 Terpenoid backbone biosynthesis 2
ghi03008 Ribosome biogenesis in eukaryotes 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi03008 Ribosome biogenesis in eukaryotes 3
ghi00860 Porphyrin metabolism 2
ghi00900 Terpenoid backbone biosynthesis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna03010 Ribosome 2
bna03008 Ribosome biogenesis in eukaryotes 2
bna00240 Pyrimidine metabolism 2
bna01232 Nucleotide metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna03008 Ribosome biogenesis in eukaryotes 2
bna00240 Pyrimidine metabolism 2
bna01232 Nucleotide metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cre03008 Ribosome biogenesis in eukaryotes 7
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sbi03008 Ribosome biogenesis in eukaryotes 4
sbi03010 Ribosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sot03008 Ribosome biogenesis in eukaryotes 6
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cit03008 Ribosome biogenesis in eukaryotes 6
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bdi03008 Ribosome biogenesis in eukaryotes 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta03008 Ribosome biogenesis in eukaryotes 3
nta03430 Mismatch repair 2
nta03460 Fanconi anemia pathway 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta03008 Ribosome biogenesis in eukaryotes 3
nta03430 Mismatch repair 2
nta03460 Fanconi anemia pathway 2
Expression Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern
Entrez Gene ID* 819411 102668105 100806066 101251776 4342750 100284315 103855657 100264761 7457974 7458238 11420033 123160359 123149655 123407750 107953196 107949876 106426399 106427723 5718769 110437405 102603390 102621396 100824522 107800862 107788893
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