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Orthologous genes in OrthoFinder**

Species Gene Description
 vvi-u.5   100268018   zinc finger protein VAR3, chloroplastic 
 vvi-r.5   100268018   zinc finger protein VAR3, chloroplastic 
 vvi-m.5   100268018   zinc finger protein VAR3, chloroplastic 
 ath-u.5   AT1G48570   zinc finger (Ran-binding) family protein 
 gma-u.5   100819532   zinc finger protein VAR3, chloroplastic 
 gma-u.5   100811037   zinc finger protein VAR3, chloroplastic 
 ppo-u.5   7493489   uncharacterized LOC7493489 
 mtr-u.5   11422224   zinc finger protein VAR3, chloroplastic 
 sly-u.5   101250201   zinc finger protein VAR3, chloroplastic 
 osa-u.5   4333869   zinc finger protein VAR3, chloroplastic 
 zma-u.5   100276543   uncharacterized LOC100276543 

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Top 50 coexpressed genes to 100268018 (vvi-u.5 coexpression data)

 KEGG ID   Pathway name   #genes in coex list   #genes in genome   -log10(p)   Link to the KEGG* map 
(Multiple genes)

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Top 50 enrichment test to 100268018 (vvi-u.5 coexpression data)

CoexMap"100268018"


vviLOC100268018 | Entrez gene ID : 100268018      
Species vvi ath gma ppo mtr sly osa zma bdi hvu bra cit bna sbi ghi sot nta cre tae
Paralog 3 1 2 1 1 1 1 1 0 0 0 0 0 0 0 0 0 0 0
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CoexMap
Chloroplast
Nucleus

functional annotation
KEGG
GO BP
GO CC
GO:0005737 [list] [network] cytoplasm  (4496 genes)  IEA  
GO MF
GO:0003729 [list] [network] mRNA binding  (233 genes)  IEA  
Protein XP_002278671.2 [sequence] [blastp]
Subcellular
localization
wolf
chlo 5,  chlo_mito 4,  mito 4,  cyto_mito 2  (predict for XP_002278671.2)
Subcellular
localization
TargetP
mito 8,  chlo 5  (predict for XP_002278671.2)
Gene expression
All samples [Expression pattern]
Tissue specificity*
Show Coexpressed Genes
Gene Function KEGG Entrez
Gene
ID		 Other ID Link Target Reference

vvi-u.5
for
100268018
vvi-r.5
for
100268018
vvi-m.5
for
100268018
ath-u.5
for
AT1G48570
gma-u.5
for
100819532
gma-u.5
for
100811037
ppo-u.5
for
7493489
mtr-u.5
for
11422224
sly-u.5
for
101250201
osa-u.5
for
4333869
zma-u.5
for
100276543


Ortholog ID: 11498
Species vvi ath gma gma bra ppo mtr ghi bna bna cit sly sot nta nta osa zma tae tae hvu sbi bdi
Symbol LOC100268018 AT1G48570 LOC100811037 LOC100819532 LOC103871464 LOC7493489 LOC11422224 LOC107923924 LOC111204644 LOC106406292 LOC102624554 LOC101250201 LOC102595166 LOC107799385 LOC107761055 LOC4333869 LOC100276543 LOC123087124 LOC123090837 LOC123450193 LOC8062922 LOC100833528
Function* zinc finger protein VAR3, chloroplastic zinc finger (Ran-binding) family protein zinc finger protein VAR3, chloroplastic zinc finger protein VAR3, chloroplastic zinc finger protein VAR3, chloroplastic uncharacterized LOC7493489 zinc finger protein VAR3, chloroplastic zinc finger protein VAR3, chloroplastic zinc finger protein VAR3, chloroplastic zinc finger protein VAR3, chloroplastic-like zinc finger protein VAR3, chloroplastic zinc finger protein VAR3, chloroplastic zinc finger protein VAR3, chloroplastic zinc finger protein VAR3, chloroplastic zinc finger protein VAR3, chloroplastic zinc finger protein VAR3, chloroplastic uncharacterized LOC100276543 zinc finger protein VAR3, chloroplastic zinc finger protein VAR3, chloroplastic uncharacterized LOC123450193 zinc finger protein VAR3, chloroplastic zinc finger protein VAR3, chloroplastic
Coexmap

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Coexpression

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KEGG Info
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
vvi03008 Ribosome biogenesis in eukaryotes 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma04626 Plant-pathogen interaction 3
gma00220 Arginine biosynthesis 2
gma00330 Arginine and proline metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
mtr01240 Biosynthesis of cofactors 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sot01232 Nucleotide metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta01232 Nucleotide metabolism 4
nta00250 Alanine, aspartate and glutamate metabolism 4
nta01240 Biosynthesis of cofactors 4
nta00230 Purine metabolism 3
nta00240 Pyrimidine metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta01232 Nucleotide metabolism 4
nta00230 Purine metabolism 3
nta00250 Alanine, aspartate and glutamate metabolism 3
nta01240 Biosynthesis of cofactors 3
nta03018 RNA degradation 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
osa03008 Ribosome biogenesis in eukaryotes 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
zma03018 RNA degradation 3
zma03008 Ribosome biogenesis in eukaryotes 2
zma03083 Polycomb repressive complex 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae03008 Ribosome biogenesis in eukaryotes 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae03008 Ribosome biogenesis in eukaryotes 6
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
hvu03008 Ribosome biogenesis in eukaryotes 6
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sbi03008 Ribosome biogenesis in eukaryotes 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bdi03008 Ribosome biogenesis in eukaryotes 3
bdi03018 RNA degradation 2
Expression Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern
Entrez Gene ID* 100268018 841278 100811037 100819532 103871464 7493489 11422224 107923924 111204644 106406292 102624554 101250201 102595166 107799385 107761055 4333869 100276543 123087124 123090837 123450193 8062922 100833528
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