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Orthologous genes in OrthoFinder**

Species Gene Description
 bdi-r.1   100833528   zinc finger protein VAR3, chloroplastic 
 tae-r.2   123090837   zinc finger protein VAR3, chloroplastic 
 tae-r.2   123087124   zinc finger protein VAR3, chloroplastic 
 hvu-r.1   123450193   uncharacterized LOC123450193 
 osa-u.5   4333869   zinc finger protein VAR3, chloroplastic 
 zma-u.5   100276543   uncharacterized LOC100276543 
 sbi-r.1   8062922   zinc finger protein VAR3, chloroplastic 
 ath-u.5   AT1G48570   zinc finger (Ran-binding) family protein 
 gma-u.5   100819532   zinc finger protein VAR3, chloroplastic 
 gma-u.5   100811037   zinc finger protein VAR3, chloroplastic 
 sly-u.5   101250201   zinc finger protein VAR3, chloroplastic 
 bra-r.6   103871464   zinc finger protein VAR3, chloroplastic 
 vvi-u.5   100268018   zinc finger protein VAR3, chloroplastic 
 ppo-u.5   7493489   uncharacterized LOC7493489 
 mtr-u.5   11422224   zinc finger protein VAR3, chloroplastic 
 ghi-r.1   107923924   zinc finger protein VAR3, chloroplastic 
 bna-r.1   106406292   zinc finger protein VAR3, chloroplastic-like 
 bna-r.1   111204644   zinc finger protein VAR3, chloroplastic 
 sot-r.1   102595166   zinc finger protein VAR3, chloroplastic 
 cit-r.1   102624554   zinc finger protein VAR3, chloroplastic 
 nta-r.1   107761055   zinc finger protein VAR3, chloroplastic 
 nta-r.1   107799385   zinc finger protein VAR3, chloroplastic 

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Top 50 coexpressed genes to 100833528 (bdi-r.1 coexpression data)

 KEGG ID   Pathway name   #genes in coex list   #genes in genome   -log10(p)   Link to the KEGG* map 
(Multiple genes)

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Top 50 enrichment test to 100833528 (bdi-r.1 coexpression data)

CoexMap"100833528"


bdiLOC100833528 | Entrez gene ID : 100833528      
Species bdi tae hvu osa zma sbi ath gma sly bra vvi ppo mtr ghi bna sot cit nta cre
Paralog 1 2 1 1 1 1 1 2 1 1 1 1 1 1 2 1 1 2 0
Show/Hide Columns:        



CoexMap
Chloroplast
Nucleus

functional annotation
KEGG
GO BP
GO CC
GO:0005737 [list] [network] cytoplasm  (4615 genes)  IEA  
GO MF
GO:0003729 [list] [network] mRNA binding  (271 genes)  IEA  
Protein XP_003559518.1 [sequence] [blastp]
Subcellular
localization
wolf
chlo 6,  chlo_mito 4,  mito 1,  cyto_mito 1  (predict for XP_003559518.1)
Subcellular
localization
TargetP
mito 5,  chlo 3  (predict for XP_003559518.1)
Gene expression
All samples [Expression pattern]
Tissue specificity*
Show Coexpressed Genes
Gene Function KEGG Entrez
Gene
ID		 Other ID Link Target Reference

bdi-r.1
for
100833528
tae-r.2
for
123090837
tae-r.2
for
123087124
hvu-r.1
for
123450193
osa-u.5
for
4333869
zma-u.5
for
100276543
sbi-r.1
for
8062922
ath-u.5
for
AT1G48570
gma-u.5
for
100819532
gma-u.5
for
100811037
sly-u.5
for
101250201
bra-r.6
for
103871464
vvi-u.5
for
100268018
ppo-u.5
for
7493489
mtr-u.5
for
11422224
ghi-r.1
for
107923924
bna-r.1
for
106406292
bna-r.1
for
111204644
sot-r.1
for
102595166
cit-r.1
for
102624554
nta-r.1
for
107761055
nta-r.1
for
107799385


Ortholog ID: 11498
Species bdi tae tae hvu osa zma sbi ath gma gma sly bra vvi ppo mtr ghi bna bna sot cit nta nta
Symbol LOC100833528 LOC123090837 LOC123087124 LOC123450193 LOC4333869 LOC100276543 LOC8062922 AT1G48570 LOC100819532 LOC100811037 LOC101250201 LOC103871464 LOC100268018 LOC7493489 LOC11422224 LOC107923924 LOC106406292 LOC111204644 LOC102595166 LOC102624554 LOC107761055 LOC107799385
Function* zinc finger protein VAR3, chloroplastic zinc finger protein VAR3, chloroplastic zinc finger protein VAR3, chloroplastic uncharacterized LOC123450193 zinc finger protein VAR3, chloroplastic uncharacterized LOC100276543 zinc finger protein VAR3, chloroplastic zinc finger (Ran-binding) family protein zinc finger protein VAR3, chloroplastic zinc finger protein VAR3, chloroplastic zinc finger protein VAR3, chloroplastic zinc finger protein VAR3, chloroplastic zinc finger protein VAR3, chloroplastic uncharacterized LOC7493489 zinc finger protein VAR3, chloroplastic zinc finger protein VAR3, chloroplastic zinc finger protein VAR3, chloroplastic-like zinc finger protein VAR3, chloroplastic zinc finger protein VAR3, chloroplastic zinc finger protein VAR3, chloroplastic zinc finger protein VAR3, chloroplastic zinc finger protein VAR3, chloroplastic
Coexmap

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Coexpression

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KEGG Info
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bdi03008 Ribosome biogenesis in eukaryotes 3
bdi03018 RNA degradation 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae03008 Ribosome biogenesis in eukaryotes 6
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae03008 Ribosome biogenesis in eukaryotes 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
hvu03008 Ribosome biogenesis in eukaryotes 6
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
osa03008 Ribosome biogenesis in eukaryotes 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
zma03018 RNA degradation 3
zma03008 Ribosome biogenesis in eukaryotes 2
zma03083 Polycomb repressive complex 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sbi03008 Ribosome biogenesis in eukaryotes 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma04626 Plant-pathogen interaction 3
gma00220 Arginine biosynthesis 2
gma00330 Arginine and proline metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
vvi03008 Ribosome biogenesis in eukaryotes 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
mtr01240 Biosynthesis of cofactors 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sot01232 Nucleotide metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta01232 Nucleotide metabolism 4
nta00230 Purine metabolism 3
nta00250 Alanine, aspartate and glutamate metabolism 3
nta01240 Biosynthesis of cofactors 3
nta03018 RNA degradation 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta01232 Nucleotide metabolism 4
nta00250 Alanine, aspartate and glutamate metabolism 4
nta01240 Biosynthesis of cofactors 4
nta00230 Purine metabolism 3
nta00240 Pyrimidine metabolism 2
Expression Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern
Entrez Gene ID* 100833528 123090837 123087124 123450193 4333869 100276543 8062922 841278 100819532 100811037 101250201 103871464 100268018 7493489 11422224 107923924 106406292 111204644 102595166 102624554 107761055 107799385
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