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Orthologous genes in OrthoFinder**

Species Gene Description
 bna-r.1   111204644   zinc finger protein VAR3, chloroplastic 
 bna-r.1   106406292   zinc finger protein VAR3, chloroplastic-like 
 bra-r.6   103871464   zinc finger protein VAR3, chloroplastic 
 ath-u.5   AT1G48570   zinc finger (Ran-binding) family protein 
 ghi-r.1   107923924   zinc finger protein VAR3, chloroplastic 
 cit-r.1   102624554   zinc finger protein VAR3, chloroplastic 
 gma-u.5   100819532   zinc finger protein VAR3, chloroplastic 
 gma-u.5   100811037   zinc finger protein VAR3, chloroplastic 
 vvi-u.5   100268018   zinc finger protein VAR3, chloroplastic 
 ppo-u.5   7493489   uncharacterized LOC7493489 
 mtr-u.5   11422224   zinc finger protein VAR3, chloroplastic 
 sly-u.5   101250201   zinc finger protein VAR3, chloroplastic 
 sot-r.1   102595166   zinc finger protein VAR3, chloroplastic 
 nta-r.1   107761055   zinc finger protein VAR3, chloroplastic 
 nta-r.1   107799385   zinc finger protein VAR3, chloroplastic 
 osa-u.5   4333869   zinc finger protein VAR3, chloroplastic 
 zma-u.5   100276543   uncharacterized LOC100276543 
 tae-r.2   123090837   zinc finger protein VAR3, chloroplastic 
 tae-r.2   123087124   zinc finger protein VAR3, chloroplastic 
 hvu-r.1   123450193   uncharacterized LOC123450193 
 sbi-r.1   8062922   zinc finger protein VAR3, chloroplastic 
 bdi-r.1   100833528   zinc finger protein VAR3, chloroplastic 

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Top 50 coexpressed genes to 111204644 (bna-r.1 coexpression data)

 KEGG ID   Pathway name   #genes in coex list   #genes in genome   -log10(p)   Link to the KEGG* map 
(Multiple genes)

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Top 50 enrichment test to 111204644 (bna-r.1 coexpression data)

CoexMap"111204644"


bnaLOC111204644 | Entrez gene ID : 111204644    
Species bna bra ath ghi cit gma vvi ppo mtr sly sot nta osa zma tae hvu sbi bdi cre
Paralog 2 1 1 1 1 2 1 1 1 1 1 2 1 1 2 1 1 1 0
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CoexMap
Chloroplast
Nucleus

functional annotation
KEGG
GO BP
GO CC
GO:0005737 [list] [network] cytoplasm  (16489 genes)  IEA  
GO MF
GO:0003729 [list] [network] mRNA binding  (918 genes)  IEA  
Protein XP_048615483.1 [sequence] [blastp]
Subcellular
localization
wolf
chlo 10  (predict for XP_048615483.1)
Subcellular
localization
TargetP
chlo 8,  mito 3  (predict for XP_048615483.1)
Gene expression
All samples [Expression pattern]
Tissue specificity*
Show Coexpressed Genes
Gene Function KEGG Entrez
Gene
ID		 Other ID Link Target Reference

bna-r.1
for
111204644
bna-r.1
for
106406292
bra-r.6
for
103871464
ath-u.5
for
AT1G48570
ghi-r.1
for
107923924
cit-r.1
for
102624554
gma-u.5
for
100819532
gma-u.5
for
100811037
vvi-u.5
for
100268018
ppo-u.5
for
7493489
mtr-u.5
for
11422224
sly-u.5
for
101250201
sot-r.1
for
102595166
nta-r.1
for
107761055
nta-r.1
for
107799385
osa-u.5
for
4333869
zma-u.5
for
100276543
tae-r.2
for
123090837
tae-r.2
for
123087124
hvu-r.1
for
123450193
sbi-r.1
for
8062922
bdi-r.1
for
100833528


Ortholog ID: 11498
Species bna bna bra ath ghi cit gma gma vvi ppo mtr sly sot nta nta osa zma tae tae hvu sbi bdi
Symbol LOC111204644 LOC106406292 LOC103871464 AT1G48570 LOC107923924 LOC102624554 LOC100819532 LOC100811037 LOC100268018 LOC7493489 LOC11422224 LOC101250201 LOC102595166 LOC107761055 LOC107799385 LOC4333869 LOC100276543 LOC123090837 LOC123087124 LOC123450193 LOC8062922 LOC100833528
Function* zinc finger protein VAR3, chloroplastic zinc finger protein VAR3, chloroplastic-like zinc finger protein VAR3, chloroplastic zinc finger (Ran-binding) family protein zinc finger protein VAR3, chloroplastic zinc finger protein VAR3, chloroplastic zinc finger protein VAR3, chloroplastic zinc finger protein VAR3, chloroplastic zinc finger protein VAR3, chloroplastic uncharacterized LOC7493489 zinc finger protein VAR3, chloroplastic zinc finger protein VAR3, chloroplastic zinc finger protein VAR3, chloroplastic zinc finger protein VAR3, chloroplastic zinc finger protein VAR3, chloroplastic zinc finger protein VAR3, chloroplastic uncharacterized LOC100276543 zinc finger protein VAR3, chloroplastic zinc finger protein VAR3, chloroplastic uncharacterized LOC123450193 zinc finger protein VAR3, chloroplastic zinc finger protein VAR3, chloroplastic
Coexmap

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Coexpression

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KEGG Info
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma04626 Plant-pathogen interaction 3
gma00220 Arginine biosynthesis 2
gma00330 Arginine and proline metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
vvi03008 Ribosome biogenesis in eukaryotes 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
mtr01240 Biosynthesis of cofactors 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sot01232 Nucleotide metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta01232 Nucleotide metabolism 4
nta00230 Purine metabolism 3
nta00250 Alanine, aspartate and glutamate metabolism 3
nta01240 Biosynthesis of cofactors 3
nta03018 RNA degradation 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta01232 Nucleotide metabolism 4
nta00250 Alanine, aspartate and glutamate metabolism 4
nta01240 Biosynthesis of cofactors 4
nta00230 Purine metabolism 3
nta00240 Pyrimidine metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
osa03008 Ribosome biogenesis in eukaryotes 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
zma03018 RNA degradation 3
zma03008 Ribosome biogenesis in eukaryotes 2
zma03083 Polycomb repressive complex 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae03008 Ribosome biogenesis in eukaryotes 6
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae03008 Ribosome biogenesis in eukaryotes 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
hvu03008 Ribosome biogenesis in eukaryotes 6
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sbi03008 Ribosome biogenesis in eukaryotes 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bdi03008 Ribosome biogenesis in eukaryotes 3
bdi03018 RNA degradation 2
Expression Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern
Entrez Gene ID* 111204644 106406292 103871464 841278 107923924 102624554 100819532 100811037 100268018 7493489 11422224 101250201 102595166 107761055 107799385 4333869 100276543 123090837 123087124 123450193 8062922 100833528
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