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Orthologous genes in OrthoFinder**

Species Gene Description
 zma-u.5  100273844  Putative pentatricopeptide repeat family protein 
 zma-r.6  100273844  Putative pentatricopeptide repeat family protein 
 osa-u.5  4341131  pentatricopeptide repeat-containing protein At3g53360, mitochondrial 
 ath-u.5  AT3G53360  Tetratricopeptide repeat (TPR)-like superfamily protein 
 gma-u.5  100810873  pentatricopeptide repeat-containing protein At3g53360, mitochondrial 
 gma-u.5  100786133  pentatricopeptide repeat-containing protein At3g53360, mitochondrial 
 sly-u.5  101248513  pentatricopeptide repeat-containing protein At3g53360, mitochondrial 
 vvi-u.5  100854969  pentatricopeptide repeat-containing protein At3g53360, mitochondrial 
 mtr-u.5  11429894  pentatricopeptide repeat-containing protein At3g53360, mitochondrial 

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Top 50 coexpressed genes to 100273844 (zma-u.5 coexpression data)

 KEGG ID   Pathway name   #genes in coex list   #genes in genome   -log10(p)   Link to the KEGG* map 
(Multiple genes)

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Top 50 enrichment test to 100273844 (zma-u.5 coexpression data)

CoexMap"100273844"


zmaLOC100273844 | Entrez gene ID : 100273844
Species zma osa ath gma sly vvi mtr bdi hvu bra cit bna ppo sbi ghi sot nta cre tae
Paralog 2 1 1 2 1 1 1 0 0 0 0 0 0 0 0 0 0 0 0
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CoexMap
Chloroplast
Nucleus

functional annotation
KEGG
GO BP
GO:0009451 [list] [network] RNA modification  (350 genes)  IEA  
GO CC
GO:0043231 [list] [network] intracellular membrane-bounded organelle  (6389 genes)  IEA  
GO MF
GO:0003723 [list] [network] RNA binding  (1549 genes)  IEA  
GO:0005515 [list] [network] protein binding  (4389 genes)  IEA  
Protein NP_001347397.1 [sequence] [blastp]
XP_008661634.1 [sequence] [blastp]
XP_035818862.1 [sequence] [blastp]
Subcellular
localization
wolf
chlo 9,  nucl 1,  extr 1  (predict for NP_001347397.1)
chlo 9,  nucl 1,  extr 1  (predict for XP_008661634.1)
chlo 9,  nucl 1,  extr 1  (predict for XP_035818862.1)
Subcellular
localization
TargetP
chlo 2  (predict for NP_001347397.1)
chlo 2  (predict for XP_008661634.1)
chlo 2  (predict for XP_035818862.1)
Gene expression
All samples [Expression pattern]
Tissue specificity*
Show Coexpressed Genes
Gene Function KEGG Entrez
Gene
ID
Other ID Link Target Reference

zma-u.5
for
100273844


zma-r.6
for
100273844


osa-u.5
for
4341131


ath-u.5
for
AT3G53360


gma-u.5
for
100810873


gma-u.5
for
100786133


sly-u.5
for
101248513


vvi-u.5
for
100854969


mtr-u.5
for
11429894



Ortholog ID: 11973
Species zma sbi osa tae hvu bdi ath gma gma sly bra vvi mtr bna bna sot cit nta nta
Symbol LOC100273844 LOC8075938 LOC4341131 LOC123053979 LOC123427256 LOC104585383 AT3G53360 LOC100810873 LOC100786133 LOC101248513 LOC103841262 LOC100854969 LOC11429894 LOC106433941 LOC106434814 LOC107060288 LOC102616208 LOC107812676 LOC107803348
Function* Putative pentatricopeptide repeat family protein pentatricopeptide repeat-containing protein At3g53360, mitochondrial pentatricopeptide repeat-containing protein At3g53360, mitochondrial pentatricopeptide repeat-containing protein At3g53360, mitochondrial pentatricopeptide repeat-containing protein At3g53360, mitochondrial pentatricopeptide repeat-containing protein At3g53360, mitochondrial Tetratricopeptide repeat (TPR)-like superfamily protein pentatricopeptide repeat-containing protein At3g53360, mitochondrial pentatricopeptide repeat-containing protein At3g53360, mitochondrial pentatricopeptide repeat-containing protein At3g53360, mitochondrial pentatricopeptide repeat-containing protein At3g53360, mitochondrial pentatricopeptide repeat-containing protein At3g53360, mitochondrial pentatricopeptide repeat-containing protein At3g53360, mitochondrial pentatricopeptide repeat-containing protein At3g53360, mitochondrial pentatricopeptide repeat-containing protein At3g53360, mitochondrial-like pentatricopeptide repeat-containing protein At3g53360, mitochondrial pentatricopeptide repeat-containing protein At3g53360, mitochondrial-like pentatricopeptide repeat-containing protein At3g53360, mitochondrial-like pentatricopeptide repeat-containing protein At3g53360, mitochondrial-like
Coexmap

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Coexpression

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KEGG Info
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
hvu03040 Spliceosome 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma04144 Endocytosis 6
Expression Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern
Entrez Gene ID* 100273844 8075938 4341131 123053979 123427256 104585383 824504 100810873 100786133 101248513 103841262 100854969 11429894 106433941 106434814 107060288 102616208 107812676 107803348
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