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Orthologous genes in OrthoFinder**

Species Gene Description
 sbi-r.1  8075938  pentatricopeptide repeat-containing protein At3g53360, mitochondrial 
 zma-u.5  100273844  Putative pentatricopeptide repeat family protein 
 osa-u.5  4341131  pentatricopeptide repeat-containing protein At3g53360, mitochondrial 
 ath-u.5  AT3G53360  Tetratricopeptide repeat (TPR)-like superfamily protein 
 gma-u.5  100786133  pentatricopeptide repeat-containing protein At3g53360, mitochondrial 
 gma-u.5  100810873  pentatricopeptide repeat-containing protein At3g53360, mitochondrial 
 sly-u.5  101248513  pentatricopeptide repeat-containing protein At3g53360, mitochondrial 
 vvi-u.5  100854969  pentatricopeptide repeat-containing protein At3g53360, mitochondrial 
 mtr-u.5  11429894  pentatricopeptide repeat-containing protein At3g53360, mitochondrial 

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Top 50 coexpressed genes to 8075938 (sbi-r.1 coexpression data)

 KEGG ID   Pathway name   #genes in coex list   #genes in genome   -log10(p)   Link to the KEGG* map 
(Multiple genes)

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Top 50 enrichment test to 8075938 (sbi-r.1 coexpression data)

CoexMap"8075938"


sbiLOC8075938 | Entrez gene ID : 8075938
Species sbi zma osa ath gma sly vvi mtr bra nta cre hvu cit bdi ppo sot tae bna ghi
Paralog 1 1 1 1 2 1 1 1 0 0 0 0 0 0 0 0 0 0 0
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CoexMap
Chloroplast
Nucleus

functional annotation
KEGG
GO BP
GO:0009451 [list] [network] RNA modification  (378 genes)  IEA  
GO CC
GO MF
GO:0003723 [list] [network] RNA binding  (1243 genes)  IEA  
GO:0005515 [list] [network] protein binding  (4172 genes)  IEA  
Protein XP_002448197.2 [sequence] [blastp]
Subcellular
localization
wolf
chlo 10  (predict for XP_002448197.2)
Subcellular
localization
TargetP
chlo 5  (predict for XP_002448197.2)
Gene expression
All samples [Expression pattern]
Tissue specificity*
Show Coexpressed Genes
Gene Function KEGG Entrez
Gene
ID
Other ID Link Target Reference

sbi-r.1
for
8075938

.

zma-u.5
for
100273844

.

osa-u.5
for
4341131

.

ath-u.5
for
AT3G53360

.

gma-u.5
for
100786133

.

gma-u.5
for
100810873

.

sly-u.5
for
101248513

.

vvi-u.5
for
100854969

.

mtr-u.5
for
11429894

.


Ortholog ID: 11973
Species ath gma gma sly osa zma bra vvi mtr tae hvu bna bna sbi sot cit bdi nta nta
Symbol AT3G53360 LOC100810873 LOC100786133 LOC101248513 LOC4341131 LOC100273844 LOC103841262 LOC100854969 LOC11429894 LOC123053979 LOC123427256 LOC106433941 LOC106434814 LOC8075938 LOC107060288 LOC102616208 LOC104585383 LOC107812676 LOC107803348
Function* Tetratricopeptide repeat (TPR)-like superfamily protein pentatricopeptide repeat-containing protein At3g53360, mitochondrial pentatricopeptide repeat-containing protein At3g53360, mitochondrial pentatricopeptide repeat-containing protein At3g53360, mitochondrial pentatricopeptide repeat-containing protein At3g53360, mitochondrial Putative pentatricopeptide repeat family protein pentatricopeptide repeat-containing protein At3g53360, mitochondrial pentatricopeptide repeat-containing protein At3g53360, mitochondrial pentatricopeptide repeat-containing protein At3g53360, mitochondrial pentatricopeptide repeat-containing protein At3g53360, mitochondrial pentatricopeptide repeat-containing protein At3g53360, mitochondrial pentatricopeptide repeat-containing protein At3g53360, mitochondrial pentatricopeptide repeat-containing protein At3g53360, mitochondrial-like pentatricopeptide repeat-containing protein At3g53360, mitochondrial pentatricopeptide repeat-containing protein At3g53360, mitochondrial pentatricopeptide repeat-containing protein At3g53360, mitochondrial-like pentatricopeptide repeat-containing protein At3g53360, mitochondrial pentatricopeptide repeat-containing protein At3g53360, mitochondrial-like pentatricopeptide repeat-containing protein At3g53360, mitochondrial-like
Coexmap

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Coexpression

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KEGG Info
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma04144 Endocytosis 6
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
hvu03040 Spliceosome 4
Expression Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern
Entrez Gene ID* 824504 100810873 100786133 101248513 4341131 100273844 103841262 100854969 11429894 123053979 123427256 106433941 106434814 8075938 107060288 102616208 104585383 107812676 107803348
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