Select Species**


OK


Orthologous genes in OrthoFinder**

Species Gene Description
 sot-r.1   107060288   pentatricopeptide repeat-containing protein At3g53360, mitochondrial 
 sly-u.5   101248513   pentatricopeptide repeat-containing protein At3g53360, mitochondrial 
 nta-r.1   107803348   pentatricopeptide repeat-containing protein At3g53360, mitochondrial-like 
 nta-r.1   107812676   pentatricopeptide repeat-containing protein At3g53360, mitochondrial-like 
 ath-u.5   AT3G53360   Tetratricopeptide repeat (TPR)-like superfamily protein 
 gma-u.5   100786133   pentatricopeptide repeat-containing protein At3g53360, mitochondrial 
 gma-u.5   100810873   pentatricopeptide repeat-containing protein At3g53360, mitochondrial 
 bra-r.6   103841262   pentatricopeptide repeat-containing protein At3g53360, mitochondrial 
 vvi-u.5   100854969   pentatricopeptide repeat-containing protein At3g53360, mitochondrial 
 mtr-u.5   11429894   pentatricopeptide repeat-containing protein At3g53360, mitochondrial 
 bna-r.1   106433941   pentatricopeptide repeat-containing protein At3g53360, mitochondrial 
 bna-r.1   106434814   pentatricopeptide repeat-containing protein At3g53360, mitochondrial-like 
 cit-r.1   102616208   pentatricopeptide repeat-containing protein At3g53360, mitochondrial-like 
 osa-u.5   4341131   pentatricopeptide repeat-containing protein At3g53360, mitochondrial 
 zma-u.5   100273844   Putative pentatricopeptide repeat family protein 
 tae-r.2   123053979   pentatricopeptide repeat-containing protein At3g53360, mitochondrial 
 hvu-r.1   123427256   pentatricopeptide repeat-containing protein At3g53360, mitochondrial 
 sbi-r.1   8075938   pentatricopeptide repeat-containing protein At3g53360, mitochondrial 
 bdi-r.1   104585383   pentatricopeptide repeat-containing protein At3g53360, mitochondrial 

close


Top 50 coexpressed genes to 107060288 (sot-r.1 coexpression data)

 KEGG ID   Pathway name   #genes in coex list   #genes in genome   -log10(p)   Link to the KEGG* map 
(Multiple genes)

close

close

Top 50 enrichment test to 107060288 (sot-r.1 coexpression data)

CoexMap"107060288"


sotLOC107060288 | Entrez gene ID : 107060288    
Species sot sly nta ath gma bra vvi mtr bna cit osa zma tae hvu sbi bdi ppo cre ghi
Paralog 1 1 2 1 2 1 1 1 2 1 1 1 1 1 1 1 0 0 0
Show/Hide Columns:        



CoexMap
Chloroplast
Nucleus

functional annotation
KEGG
GO BP
GO:0009451 [list] [network] RNA modification  (378 genes)  IEA  
GO CC
GO:0043231 [list] [network] intracellular membrane-bounded organelle  (4917 genes)  IEA  
GO MF
GO:0003723 [list] [network] RNA binding  (1335 genes)  IEA  
GO:0005515 [list] [network] protein binding  (4214 genes)  IEA  
Protein XP_015163488.1 [sequence] [blastp]
Subcellular
localization
wolf
mito 4,  cyto_mito 3,  chlo 2,  nucl 2,  cysk 1  (predict for XP_015163488.1)
Subcellular
localization
TargetP
mito 6,  other 3  (predict for XP_015163488.1)
Gene expression
All samples [Expression pattern]
Tissue specificity*
Show Coexpressed Genes
Gene Function KEGG Entrez
Gene
ID		 Other ID Link Target Reference

sot-r.1
for
107060288
sly-u.5
for
101248513
nta-r.1
for
107803348
nta-r.1
for
107812676
ath-u.5
for
AT3G53360
gma-u.5
for
100786133
gma-u.5
for
100810873
bra-r.6
for
103841262
vvi-u.5
for
100854969
mtr-u.5
for
11429894
bna-r.1
for
106433941
bna-r.1
for
106434814
cit-r.1
for
102616208
osa-u.5
for
4341131
zma-u.5
for
100273844
tae-r.2
for
123053979
hvu-r.1
for
123427256
sbi-r.1
for
8075938
bdi-r.1
for
104585383


Ortholog ID: 11973
Species sot sly nta nta ath gma gma bra vvi mtr bna bna cit osa zma tae hvu sbi bdi
Symbol LOC107060288 LOC101248513 LOC107803348 LOC107812676 AT3G53360 LOC100786133 LOC100810873 LOC103841262 LOC100854969 LOC11429894 LOC106433941 LOC106434814 LOC102616208 LOC4341131 LOC100273844 LOC123053979 LOC123427256 LOC8075938 LOC104585383
Function* pentatricopeptide repeat-containing protein At3g53360, mitochondrial pentatricopeptide repeat-containing protein At3g53360, mitochondrial pentatricopeptide repeat-containing protein At3g53360, mitochondrial-like pentatricopeptide repeat-containing protein At3g53360, mitochondrial-like Tetratricopeptide repeat (TPR)-like superfamily protein pentatricopeptide repeat-containing protein At3g53360, mitochondrial pentatricopeptide repeat-containing protein At3g53360, mitochondrial pentatricopeptide repeat-containing protein At3g53360, mitochondrial pentatricopeptide repeat-containing protein At3g53360, mitochondrial pentatricopeptide repeat-containing protein At3g53360, mitochondrial pentatricopeptide repeat-containing protein At3g53360, mitochondrial pentatricopeptide repeat-containing protein At3g53360, mitochondrial-like pentatricopeptide repeat-containing protein At3g53360, mitochondrial-like pentatricopeptide repeat-containing protein At3g53360, mitochondrial Putative pentatricopeptide repeat family protein pentatricopeptide repeat-containing protein At3g53360, mitochondrial pentatricopeptide repeat-containing protein At3g53360, mitochondrial pentatricopeptide repeat-containing protein At3g53360, mitochondrial pentatricopeptide repeat-containing protein At3g53360, mitochondrial
Coexmap

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.
Coexpression

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.
KEGG Info
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma04144 Endocytosis 6
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
hvu03040 Spliceosome 4
Expression Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern
Entrez Gene ID* 107060288 101248513 107803348 107812676 824504 100786133 100810873 103841262 100854969 11429894 106433941 106434814 102616208 4341131 100273844 123053979 123427256 8075938 104585383
The preparation time of this page was 0.1 [sec].