ATTED-II : GeneCoexpression result

Species	Gene	Description
zma-u.5	100280505	uncharacterized LOC100280505
zma-r.6	100280505	uncharacterized LOC100280505
zma-m.5	100280505	uncharacterized LOC100280505
osa-u.5	4333814	pescadillo homolog
ath-u.5	AT5G14520	pescadillo-like protein
gma-u.5	100819628	pescadillo homolog
gma-u.5	100814855	pescadillo homolog
sly-u.5	101257580	pescadillo homolog
vvi-u.5	100262902	pescadillo homolog
ppo-u.5	7463036	pescadillo homolog
mtr-u.5	11424573	pescadillo homolog

functional annotation

KEGG

GO BP

GO:0000463 [list] [network] maturation of LSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)	(21 genes)	IEA
GO:0042254 [list] [network] ribosome biogenesis	(299 genes)	IEA

GO CC

GO:0070545 [list] [network] PeBoW complex	(3 genes)	IEA
GO:0005730 [list] [network] nucleolus	(246 genes)	IEA

GO MF

GO:0003723 [list] [network] RNA binding

(1549 genes)

IEA

Protein

NP_001146897.1 [sequence] [blastp]

Subcellular
localization
wolf

chlo 6, mito 3

(predict for NP_001146897.1)

Subcellular
localization
TargetP

other 7, mito 5

(predict for NP_001146897.1)

Gene expression

All samples

[Expression pattern]

Tissue specificity^*

	Gene	Function	KEGG					Entrez Gene ID	Other ID	Link	Target			Reference
	Gene	Function	KEGG					Entrez Gene ID	Other ID	Link	zma-u.5 for 100280505	zma-r.6 for 100280505	zma-m.5 for 100280505	osa-u.5 for 4333814	ath-u.5 for AT5G14520	gma-u.5 for 100819628	gma-u.5 for 100814855	sly-u.5 for 101257580	vvi-u.5 for 100262902	ppo-u.5 for 7463036	mtr-u.5 for 11424573

Ortholog ID: 9659

Species

zma

sbi

osa

tae

hvu

bdi

ath

gma

sly

bra

vvi

ppo

mtr

ghi

bna

sot

cit

nta

cre

Symbol

Function^*

uncharacterized LOC100280505

pescadillo homolog

pescadillo-like protein

pescadillo homolog

uncharacterized protein

Coexmap

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Coexpression

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KEGG Info

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
zma03010	Ribosome	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
sbi03008	Ribosome biogenesis in eukaryotes	4
sbi03040	Spliceosome	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
osa03008	Ribosome biogenesis in eukaryotes	4
osa03010	Ribosome	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
tae03008	Ribosome biogenesis in eukaryotes	4

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
tae03008	Ribosome biogenesis in eukaryotes	3

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
hvu03008	Ribosome biogenesis in eukaryotes	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
bdi03013	Nucleocytoplasmic transport	3
bdi03008	Ribosome biogenesis in eukaryotes	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
ath03008	Ribosome biogenesis in eukaryotes	6

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
gma03008	Ribosome biogenesis in eukaryotes	7

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
gma03008	Ribosome biogenesis in eukaryotes	4

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
sly03008	Ribosome biogenesis in eukaryotes	4
sly00970	Aminoacyl-tRNA biosynthesis	3
sly03018	RNA degradation	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
bra03008	Ribosome biogenesis in eukaryotes	5

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
vvi03008	Ribosome biogenesis in eukaryotes	5

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
ppo03008	Ribosome biogenesis in eukaryotes	7
ppo00970	Aminoacyl-tRNA biosynthesis	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
mtr03008	Ribosome biogenesis in eukaryotes	4

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
ghi03008	Ribosome biogenesis in eukaryotes	4
ghi00970	Aminoacyl-tRNA biosynthesis	4
ghi03010	Ribosome	3
ghi00261	Monobactam biosynthesis	2
ghi00300	Lysine biosynthesis	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
ghi00590	Arachidonic acid metabolism	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
bna03008	Ribosome biogenesis in eukaryotes	6
bna03082	ATP-dependent chromatin remodeling	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
bna03008	Ribosome biogenesis in eukaryotes	7
bna03082	ATP-dependent chromatin remodeling	2
bna00220	Arginine biosynthesis	2
bna00240	Pyrimidine metabolism	2
bna00250	Alanine, aspartate and glutamate metabolism	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
sot03008	Ribosome biogenesis in eukaryotes	7

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
cit03008	Ribosome biogenesis in eukaryotes	4
cit03020	RNA polymerase	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
nta03010	Ribosome	13
nta04120	Ubiquitin mediated proteolysis	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
nta03010	Ribosome	13
nta04120	Ubiquitin mediated proteolysis	2

Expression

Expression pattern

Entrez Gene ID^*

100280505

8062948

4333814

123087180

123090784

123447302

100832516

831303

100814855

100819628

101257580

103856085

100262902

7463036

11424573

107926534

107922956

106418518

106431646

102588856

102620972

107760163

107768178

5724754

Select Species^**

Orthologous genes in OrthoFinder^**

Top 50 coexpressed genes to 100280505 (zma-u.5 coexpression data)

Top 50 enrichment test to 100280505 (zma-u.5 coexpression data)


Species	zma	osa	ath	gma	sly	vvi	ppo	mtr	hvu	bna	cit	bra	ghi	sbi	bdi	nta	tae	cre	sot
Paralog	3	1	1	2	1	1	1	1	0	0	0	0	0	0	0	0	0	0	0

Select Species**

Orthologous genes in OrthoFinder**

Top 50 coexpressed genes to 100280505 (zma-u.5 coexpression data)

Top 50 enrichment test to 100280505 (zma-u.5 coexpression data)

Select Species^**

Orthologous genes in OrthoFinder^**