Select Species**


OK


Orthologous genes in OrthoFinder**

Species Gene Description
 ghi-r.1   107922956   pescadillo homolog 
 ghi-r.1   107926534   pescadillo homolog 
 ghi-r.1   107938782   pescadillo homolog 
 ath-u.5   AT5G14520   pescadillo-like protein 
 bra-r.6   103856085   pescadillo homolog 
 bna-r.1   106418518   pescadillo homolog 
 bna-r.1   106431646   pescadillo homolog 
 cit-r.1   102620972   pescadillo homolog 
 gma-u.5   100819628   pescadillo homolog 
 gma-u.5   100814855   pescadillo homolog 
 vvi-u.5   100262902   pescadillo homolog 
 ppo-u.5   7463036   pescadillo homolog 
 mtr-u.5   11424573   pescadillo homolog 
 sly-u.5   101257580   pescadillo homolog 
 sot-r.1   102588856   pescadillo homolog 
 nta-r.1   107768178   pescadillo homolog 
 nta-r.1   107760163   pescadillo homolog 
 osa-u.5   4333814   pescadillo homolog 
 zma-u.5   100280505   uncharacterized LOC100280505 
 tae-r.2   123090784   pescadillo homolog 
 tae-r.2   123087180   pescadillo homolog 
 tae-r.2   123095791   pescadillo homolog 
 hvu-r.1   123447302   pescadillo homolog 
 sbi-r.1   8062948   pescadillo homolog 
 bdi-r.1   100832516   pescadillo homolog 
 cre-r.1   CHLRE_16g683793v5   uncharacterized protein 

close


Top 50 coexpressed genes to 107922956 (ghi-r.1 coexpression data)

 KEGG ID   Pathway name   #genes in coex list   #genes in genome   -log10(p)   Link to the KEGG* map 
(Multiple genes)

close

close

Top 50 enrichment test to 107922956 (ghi-r.1 coexpression data)

CoexMap"107922956"


ghiLOC107922956 | Entrez gene ID : 107922956    
Species ghi ath bra bna cit gma vvi ppo mtr sly sot nta osa zma tae hvu sbi bdi cre
Paralog 3 1 1 2 1 2 1 1 1 1 1 2 1 1 3 1 1 1 1
Show/Hide Columns:        



CoexMap
Chloroplast
Nucleus

functional annotation
KEGG
GO BP
GO:0000463 [list] [network] maturation of LSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)  (47 genes)  IEA  
GO:0042254 [list] [network] ribosome biogenesis  (752 genes)  IEA  
GO CC
GO:0070545 [list] [network] PeBoW complex  (5 genes)  IEA  
GO:0005730 [list] [network] nucleolus  (469 genes)  IEA  
GO MF
GO:0003723 [list] [network] RNA binding  (3053 genes)  IEA  
Protein XP_016708648.1 [sequence] [blastp]
Subcellular
localization
wolf
nucl 5,  mito 3,  cyto 2  (predict for XP_016708648.1)
Subcellular
localization
TargetP
other 7,  mito 4  (predict for XP_016708648.1)
Gene expression
All samples [Expression pattern]
Tissue specificity*
Show Coexpressed Genes
Gene Function KEGG Entrez
Gene
ID		 Other ID Link Target Reference

ghi-r.1
for
107922956
ghi-r.1
for
107926534
ghi-r.1
for
107938782
ath-u.5
for
AT5G14520
bra-r.6
for
103856085
bna-r.1
for
106418518
bna-r.1
for
106431646
cit-r.1
for
102620972
gma-u.5
for
100819628
gma-u.5
for
100814855
vvi-u.5
for
100262902
ppo-u.5
for
7463036
mtr-u.5
for
11424573
sly-u.5
for
101257580
sot-r.1
for
102588856
nta-r.1
for
107768178
nta-r.1
for
107760163
osa-u.5
for
4333814
zma-u.5
for
100280505
tae-r.2
for
123090784
tae-r.2
for
123087180
tae-r.2
for
123095791
hvu-r.1
for
123447302
sbi-r.1
for
8062948
bdi-r.1
for
100832516
cre-r.1
for
CHLRE_16g683793v5


Ortholog ID: 9659
Species ghi ghi ghi ath bra bna bna cit gma gma vvi ppo mtr sly sot nta nta osa zma tae tae tae hvu sbi bdi cre
Symbol LOC107922956 LOC107926534 LOC107938782 AT5G14520 LOC103856085 LOC106418518 LOC106431646 LOC102620972 LOC100819628 LOC100814855 LOC100262902 LOC7463036 LOC11424573 LOC101257580 LOC102588856 LOC107768178 LOC107760163 LOC4333814 LOC100280505 LOC123090784 LOC123087180 LOC123095791 LOC123447302 LOC8062948 LOC100832516 CHLRE_16g683793v5
Function* pescadillo homolog pescadillo homolog pescadillo homolog pescadillo-like protein pescadillo homolog pescadillo homolog pescadillo homolog pescadillo homolog pescadillo homolog pescadillo homolog pescadillo homolog pescadillo homolog pescadillo homolog pescadillo homolog pescadillo homolog pescadillo homolog pescadillo homolog pescadillo homolog uncharacterized LOC100280505 pescadillo homolog pescadillo homolog pescadillo homolog pescadillo homolog pescadillo homolog pescadillo homolog uncharacterized protein
Coexmap

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.
Coexpression

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.
KEGG Info
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi00590 Arachidonic acid metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi03008 Ribosome biogenesis in eukaryotes 4
ghi00970 Aminoacyl-tRNA biosynthesis 4
ghi03010 Ribosome 3
ghi00261 Monobactam biosynthesis 2
ghi00300 Lysine biosynthesis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi03010 Ribosome 6
ghi03008 Ribosome biogenesis in eukaryotes 2
ghi00261 Monobactam biosynthesis 2
ghi00300 Lysine biosynthesis 2
ghi01230 Biosynthesis of amino acids 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ath03008 Ribosome biogenesis in eukaryotes 6
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bra03008 Ribosome biogenesis in eukaryotes 5
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna03008 Ribosome biogenesis in eukaryotes 6
bna03082 ATP-dependent chromatin remodeling 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna03008 Ribosome biogenesis in eukaryotes 7
bna03082 ATP-dependent chromatin remodeling 2
bna00220 Arginine biosynthesis 2
bna00240 Pyrimidine metabolism 2
bna00250 Alanine, aspartate and glutamate metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cit03008 Ribosome biogenesis in eukaryotes 4
cit03020 RNA polymerase 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma03008 Ribosome biogenesis in eukaryotes 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma03008 Ribosome biogenesis in eukaryotes 7
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
vvi03008 Ribosome biogenesis in eukaryotes 5
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ppo03008 Ribosome biogenesis in eukaryotes 7
ppo00970 Aminoacyl-tRNA biosynthesis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
mtr03008 Ribosome biogenesis in eukaryotes 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sly03008 Ribosome biogenesis in eukaryotes 4
sly00970 Aminoacyl-tRNA biosynthesis 3
sly03018 RNA degradation 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sot03008 Ribosome biogenesis in eukaryotes 7
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta03010 Ribosome 13
nta04120 Ubiquitin mediated proteolysis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta03010 Ribosome 13
nta04120 Ubiquitin mediated proteolysis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
osa03008 Ribosome biogenesis in eukaryotes 4
osa03010 Ribosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
zma03010 Ribosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae03008 Ribosome biogenesis in eukaryotes 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae03008 Ribosome biogenesis in eukaryotes 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae03008 Ribosome biogenesis in eukaryotes 3
tae03013 Nucleocytoplasmic transport 3
tae00563 Glycosylphosphatidylinositol (GPI)-anchor biosynthesis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
hvu03008 Ribosome biogenesis in eukaryotes 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sbi03008 Ribosome biogenesis in eukaryotes 4
sbi03040 Spliceosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bdi03013 Nucleocytoplasmic transport 3
bdi03008 Ribosome biogenesis in eukaryotes 2
Expression Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern
Entrez Gene ID* 107922956 107926534 107938782 831303 103856085 106418518 106431646 102620972 100819628 100814855 100262902 7463036 11424573 101257580 102588856 107768178 107760163 4333814 100280505 123090784 123087180 123095791 123447302 8062948 100832516 5724754
The preparation time of this page was 0.1 [sec].