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Orthologous genes in OrthoFinder**

Species Gene Description
 zma-u.5   100304366   Pentatricopeptide repeat-containing protein mitochondrial 
 zma-r.6   100304366   Pentatricopeptide repeat-containing protein mitochondrial 
 zma-m.5   100304366   Pentatricopeptide repeat-containing protein mitochondrial 
 osa-u.5   4347743   pentatricopeptide repeat-containing protein At1g20300, mitochondrial 
 ath-u.5   AT1G20300   Pentatricopeptide repeat (PPR) superfamily protein 
 gma-u.5   100800850   pentatricopeptide repeat-containing protein At1g20300, mitochondrial 
 sly-u.5   101247520   pentatricopeptide repeat-containing protein At1g20300, mitochondrial 
 vvi-u.5   100267650   pentatricopeptide repeat-containing protein At1g20300, mitochondrial 
 ppo-u.5   7493998   pentatricopeptide repeat-containing protein At1g20300, mitochondrial 
 mtr-u.5   11426023   pentatricopeptide repeat-containing protein At1g20300, mitochondrial 

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Top 50 coexpressed genes to 100304366 (zma-u.5 coexpression data)

 KEGG ID   Pathway name   #genes in coex list   #genes in genome   -log10(p)   Link to the KEGG* map 
(Multiple genes)

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Top 50 enrichment test to 100304366 (zma-u.5 coexpression data)

CoexMap"100304366"


zmaLOC100304366 | Entrez gene ID : 100304366      
Species zma osa ath gma sly vvi ppo mtr sbi nta bra cre hvu cit bdi sot tae bna ghi
Paralog 3 1 1 1 1 1 1 1 0 0 0 0 0 0 0 0 0 0 0
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CoexMap
Chloroplast
Nucleus

functional annotation
KEGG
GO BP
GO CC
GO MF
GO:0005515 [list] [network] protein binding  (4389 genes)  IEA  
Protein NP_001159276.1 [sequence] [blastp]
XP_008668231.1 [sequence] [blastp]
Subcellular
localization
wolf
chlo 5,  mito 2,  nucl 1,  extr 1,  pero 1,  cyto_nucl 1,  cysk_nucl 1,  nucl_plas 1  (predict for NP_001159276.1)
chlo 5,  mito 2,  nucl 1,  extr 1,  pero 1,  cyto_nucl 1,  cysk_nucl 1,  nucl_plas 1  (predict for XP_008668231.1)
Subcellular
localization
TargetP
other 4  (predict for NP_001159276.1)
other 4  (predict for XP_008668231.1)
Gene expression
All samples [Expression pattern]
Tissue specificity*
Show Coexpressed Genes
Gene Function KEGG Entrez
Gene
ID		 Other ID Link Target Reference

zma-u.5
for
100304366

.
zma-r.6
for
100304366

.
zma-m.5
for
100304366

.
osa-u.5
for
4347743

.
ath-u.5
for
AT1G20300

.
gma-u.5
for
100800850

.
sly-u.5
for
101247520

.
vvi-u.5
for
100267650

.
ppo-u.5
for
7493998

.
mtr-u.5
for
11426023

.


Ortholog ID: 12025
Species ath gma sly osa zma bra vvi ppo mtr tae tae hvu ghi bna bna sbi sot cit bdi nta
Symbol AT1G20300 LOC100800850 LOC101247520 LOC4347743 LOC100304366 LOC103872824 LOC100267650 LOC7493998 LOC11426023 LOC123104648 LOC123112909 LOC123397684 LOC107937578 LOC106347087 LOC106433718 LOC8054986 LOC102581822 LOC102620543 LOC100840473 LOC107812790
Function* Pentatricopeptide repeat (PPR) superfamily protein pentatricopeptide repeat-containing protein At1g20300, mitochondrial pentatricopeptide repeat-containing protein At1g20300, mitochondrial pentatricopeptide repeat-containing protein At1g20300, mitochondrial Pentatricopeptide repeat-containing protein mitochondrial pentatricopeptide repeat-containing protein At1g20300, mitochondrial pentatricopeptide repeat-containing protein At1g20300, mitochondrial pentatricopeptide repeat-containing protein At1g20300, mitochondrial pentatricopeptide repeat-containing protein At1g20300, mitochondrial pentatricopeptide repeat-containing protein At1g20300, mitochondrial pentatricopeptide repeat-containing protein At1g20300, mitochondrial pentatricopeptide repeat-containing protein At1g20300, mitochondrial pentatricopeptide repeat-containing protein At1g20300, mitochondrial pentatricopeptide repeat-containing protein At1g20300, mitochondrial pentatricopeptide repeat-containing protein At1g20300, mitochondrial pentatricopeptide repeat-containing protein At1g20300, mitochondrial pentatricopeptide repeat-containing protein At1g20300, mitochondrial-like pentatricopeptide repeat-containing protein At1g20300, mitochondrial pentatricopeptide repeat-containing protein At1g20300, mitochondrial pentatricopeptide repeat-containing protein At1g20300, mitochondrial
Coexmap

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Coexpression

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KEGG Info
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ath03008 Ribosome biogenesis in eukaryotes 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma03040 Spliceosome 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sly03008 Ribosome biogenesis in eukaryotes 7
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
osa03013 Nucleocytoplasmic transport 3
osa03010 Ribosome 2
osa03008 Ribosome biogenesis in eukaryotes 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
zma03008 Ribosome biogenesis in eukaryotes 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bra03008 Ribosome biogenesis in eukaryotes 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ppo03008 Ribosome biogenesis in eukaryotes 5
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
mtr00970 Aminoacyl-tRNA biosynthesis 5
mtr03020 RNA polymerase 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae03008 Ribosome biogenesis in eukaryotes 6
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
hvu03008 Ribosome biogenesis in eukaryotes 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi03008 Ribosome biogenesis in eukaryotes 3
ghi00260 Glycine, serine and threonine metabolism 2
ghi00750 Vitamin B6 metabolism 2
ghi01230 Biosynthesis of amino acids 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sbi01230 Biosynthesis of amino acids 3
sbi01200 Carbon metabolism 3
sbi00260 Glycine, serine and threonine metabolism 2
sbi00270 Cysteine and methionine metabolism 2
sbi01240 Biosynthesis of cofactors 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cit03008 Ribosome biogenesis in eukaryotes 2
cit01240 Biosynthesis of cofactors 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bdi00240 Pyrimidine metabolism 2
bdi01240 Biosynthesis of cofactors 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta03040 Spliceosome 4
Expression Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern
Entrez Gene ID* 838618 100800850 101247520 4347743 100304366 103872824 100267650 7493998 11426023 123104648 123112909 123397684 107937578 106347087 106433718 8054986 102581822 102620543 100840473 107812790
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