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Orthologous genes in OrthoFinder**

Species Gene Description
 tae-r.2   123112909   pentatricopeptide repeat-containing protein At1g20300, mitochondrial 
 osa-u.5   4347743   pentatricopeptide repeat-containing protein At1g20300, mitochondrial 
 zma-u.5   100304366   Pentatricopeptide repeat-containing protein mitochondrial 
 ath-u.5   AT1G20300   Pentatricopeptide repeat (PPR) superfamily protein 
 gma-u.5   100800850   pentatricopeptide repeat-containing protein At1g20300, mitochondrial 
 sly-u.5   101247520   pentatricopeptide repeat-containing protein At1g20300, mitochondrial 
 vvi-u.5   100267650   pentatricopeptide repeat-containing protein At1g20300, mitochondrial 
 ppo-u.5   7493998   pentatricopeptide repeat-containing protein At1g20300, mitochondrial 
 mtr-u.5   11426023   pentatricopeptide repeat-containing protein At1g20300, mitochondrial 

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Top 50 coexpressed genes to 123112909 (tae-r.2 coexpression data)

 KEGG ID   Pathway name   #genes in coex list   #genes in genome   -log10(p)   Link to the KEGG* map 
(Multiple genes)

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Top 50 enrichment test to 123112909 (tae-r.2 coexpression data)

CoexMap"123112909"


taeLOC123112909 | Entrez gene ID : 123112909    
Species tae osa zma ath gma sly vvi ppo mtr hvu cit bra ghi sbi bdi nta bna cre sot
Paralog 1 1 1 1 1 1 1 1 1 0 0 0 0 0 0 0 0 0 0
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CoexMap
Chloroplast
Nucleus

functional annotation
KEGG
GO BP
GO CC
GO MF
GO:0005515 [list] [network] protein binding  (16249 genes)  IEA  
Protein XP_044389943.1 [sequence] [blastp]
Subcellular
localization
wolf
mito 7,  chlo_mito 5,  chlo 2  (predict for XP_044389943.1)
Subcellular
localization
TargetP
mito 7  (predict for XP_044389943.1)
Gene expression
All samples [Expression pattern]
Tissue specificity*
Show Coexpressed Genes
Gene Function KEGG Entrez
Gene
ID		 Other ID Link Target Reference

tae-r.2
for
123112909
osa-u.5
for
4347743
zma-u.5
for
100304366
ath-u.5
for
AT1G20300
gma-u.5
for
100800850
sly-u.5
for
101247520
vvi-u.5
for
100267650
ppo-u.5
for
7493998
mtr-u.5
for
11426023


Ortholog ID: 12025
Species tae tae hvu bdi osa zma sbi ath gma sly bra vvi ppo mtr ghi bna bna sot cit nta
Symbol LOC123104648 LOC123112909 LOC123397684 LOC100840473 LOC4347743 LOC100304366 LOC8054986 AT1G20300 LOC100800850 LOC101247520 LOC103872824 LOC100267650 LOC7493998 LOC11426023 LOC107937578 LOC106347087 LOC106433718 LOC102581822 LOC102620543 LOC107812790
Function* pentatricopeptide repeat-containing protein At1g20300, mitochondrial pentatricopeptide repeat-containing protein At1g20300, mitochondrial pentatricopeptide repeat-containing protein At1g20300, mitochondrial pentatricopeptide repeat-containing protein At1g20300, mitochondrial pentatricopeptide repeat-containing protein At1g20300, mitochondrial Pentatricopeptide repeat-containing protein mitochondrial pentatricopeptide repeat-containing protein At1g20300, mitochondrial Pentatricopeptide repeat (PPR) superfamily protein pentatricopeptide repeat-containing protein At1g20300, mitochondrial pentatricopeptide repeat-containing protein At1g20300, mitochondrial pentatricopeptide repeat-containing protein At1g20300, mitochondrial pentatricopeptide repeat-containing protein At1g20300, mitochondrial pentatricopeptide repeat-containing protein At1g20300, mitochondrial pentatricopeptide repeat-containing protein At1g20300, mitochondrial pentatricopeptide repeat-containing protein At1g20300, mitochondrial pentatricopeptide repeat-containing protein At1g20300, mitochondrial pentatricopeptide repeat-containing protein At1g20300, mitochondrial pentatricopeptide repeat-containing protein At1g20300, mitochondrial-like pentatricopeptide repeat-containing protein At1g20300, mitochondrial pentatricopeptide repeat-containing protein At1g20300, mitochondrial
Coexmap

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Coexpression

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KEGG Info
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae03008 Ribosome biogenesis in eukaryotes 6
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
hvu03008 Ribosome biogenesis in eukaryotes 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bdi00240 Pyrimidine metabolism 2
bdi01240 Biosynthesis of cofactors 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
osa03013 Nucleocytoplasmic transport 3
osa03010 Ribosome 2
osa03008 Ribosome biogenesis in eukaryotes 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
zma03008 Ribosome biogenesis in eukaryotes 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sbi01230 Biosynthesis of amino acids 3
sbi01200 Carbon metabolism 3
sbi00260 Glycine, serine and threonine metabolism 2
sbi00270 Cysteine and methionine metabolism 2
sbi01240 Biosynthesis of cofactors 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ath03008 Ribosome biogenesis in eukaryotes 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma03040 Spliceosome 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sly03008 Ribosome biogenesis in eukaryotes 7
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bra03008 Ribosome biogenesis in eukaryotes 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ppo03008 Ribosome biogenesis in eukaryotes 5
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
mtr00970 Aminoacyl-tRNA biosynthesis 5
mtr03020 RNA polymerase 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi03008 Ribosome biogenesis in eukaryotes 3
ghi00260 Glycine, serine and threonine metabolism 2
ghi00750 Vitamin B6 metabolism 2
ghi01230 Biosynthesis of amino acids 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cit03008 Ribosome biogenesis in eukaryotes 2
cit01240 Biosynthesis of cofactors 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta03040 Spliceosome 4
Expression Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern
Entrez Gene ID* 123104648 123112909 123397684 100840473 4347743 100304366 8054986 838618 100800850 101247520 103872824 100267650 7493998 11426023 107937578 106347087 106433718 102581822 102620543 107812790
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