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Orthologous genes in OrthoFinder**

Species Gene Description
 bra-r.6   103872824   pentatricopeptide repeat-containing protein At1g20300, mitochondrial 
 bna-r.1   106347087   pentatricopeptide repeat-containing protein At1g20300, mitochondrial 
 bna-r.1   106433718   pentatricopeptide repeat-containing protein At1g20300, mitochondrial 
 ath-u.5   AT1G20300   Pentatricopeptide repeat (PPR) superfamily protein 
 ghi-r.1   107937578   pentatricopeptide repeat-containing protein At1g20300, mitochondrial 
 cit-r.1   102620543   pentatricopeptide repeat-containing protein At1g20300, mitochondrial 
 gma-u.5   100800850   pentatricopeptide repeat-containing protein At1g20300, mitochondrial 
 vvi-u.5   100267650   pentatricopeptide repeat-containing protein At1g20300, mitochondrial 
 ppo-u.5   7493998   pentatricopeptide repeat-containing protein At1g20300, mitochondrial 
 mtr-u.5   11426023   pentatricopeptide repeat-containing protein At1g20300, mitochondrial 
 sly-u.5   101247520   pentatricopeptide repeat-containing protein At1g20300, mitochondrial 
 sot-r.1   102581822   pentatricopeptide repeat-containing protein At1g20300, mitochondrial-like 
 nta-r.1   107812790   pentatricopeptide repeat-containing protein At1g20300, mitochondrial 
 osa-u.5   4347743   pentatricopeptide repeat-containing protein At1g20300, mitochondrial 
 zma-u.5   100304366   Pentatricopeptide repeat-containing protein mitochondrial 
 tae-r.2   123122429   pentatricopeptide repeat-containing protein At1g20300, mitochondrial 
 tae-r.2   123112909   pentatricopeptide repeat-containing protein At1g20300, mitochondrial 
 tae-r.2   123104648   pentatricopeptide repeat-containing protein At1g20300, mitochondrial 
 hvu-r.1   123397684   pentatricopeptide repeat-containing protein At1g20300, mitochondrial 
 sbi-r.1   8054986   pentatricopeptide repeat-containing protein At1g20300, mitochondrial 
 bdi-r.1   100840473   pentatricopeptide repeat-containing protein At1g20300, mitochondrial 

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Top 50 coexpressed genes to 103872824 (bra-r.6 coexpression data)

 KEGG ID   Pathway name   #genes in coex list   #genes in genome   -log10(p)   Link to the KEGG* map 
(Multiple genes)

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Top 50 enrichment test to 103872824 (bra-r.6 coexpression data)

CoexMap"103872824"


braLOC103872824 | Entrez gene ID : 103872824    
Species bra bna ath ghi cit gma vvi ppo mtr sly sot nta osa zma tae hvu sbi bdi cre
Paralog 1 2 1 1 1 1 1 1 1 1 1 1 1 1 3 1 1 1 0
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CoexMap
Chloroplast
Nucleus

functional annotation
KEGG
GO BP
GO CC
GO MF
GO:0005515 [list] [network] protein binding  (6277 genes)  IEA  
Protein XP_033128064.1 [sequence] [blastp]
Subcellular
localization
wolf
mito 4,  chlo 3,  nucl 2,  cyto_mito 2,  mito_plas 2  (predict for XP_033128064.1)
Subcellular
localization
TargetP
mito 7  (predict for XP_033128064.1)
Gene expression
All samples [Expression pattern]
Tissue specificity*
Show Coexpressed Genes
Gene Function KEGG Entrez
Gene
ID		 Other ID Link Target Reference

bra-r.6
for
103872824
bna-r.1
for
106347087
bna-r.1
for
106433718
ath-u.5
for
AT1G20300
ghi-r.1
for
107937578
cit-r.1
for
102620543
gma-u.5
for
100800850
vvi-u.5
for
100267650
ppo-u.5
for
7493998
mtr-u.5
for
11426023
sly-u.5
for
101247520
sot-r.1
for
102581822
nta-r.1
for
107812790
osa-u.5
for
4347743
zma-u.5
for
100304366
tae-r.2
for
123122429
tae-r.2
for
123112909
tae-r.2
for
123104648
hvu-r.1
for
123397684
sbi-r.1
for
8054986
bdi-r.1
for
100840473


Ortholog ID: 12025
Species bra bna bna ath ghi cit gma vvi ppo mtr sly sot nta osa zma tae tae tae hvu sbi bdi
Symbol LOC103872824 LOC106347087 LOC106433718 AT1G20300 LOC107937578 LOC102620543 LOC100800850 LOC100267650 LOC7493998 LOC11426023 LOC101247520 LOC102581822 LOC107812790 LOC4347743 LOC100304366 LOC123122429 LOC123112909 LOC123104648 LOC123397684 LOC8054986 LOC100840473
Function* pentatricopeptide repeat-containing protein At1g20300, mitochondrial pentatricopeptide repeat-containing protein At1g20300, mitochondrial pentatricopeptide repeat-containing protein At1g20300, mitochondrial Pentatricopeptide repeat (PPR) superfamily protein pentatricopeptide repeat-containing protein At1g20300, mitochondrial pentatricopeptide repeat-containing protein At1g20300, mitochondrial pentatricopeptide repeat-containing protein At1g20300, mitochondrial pentatricopeptide repeat-containing protein At1g20300, mitochondrial pentatricopeptide repeat-containing protein At1g20300, mitochondrial pentatricopeptide repeat-containing protein At1g20300, mitochondrial pentatricopeptide repeat-containing protein At1g20300, mitochondrial pentatricopeptide repeat-containing protein At1g20300, mitochondrial-like pentatricopeptide repeat-containing protein At1g20300, mitochondrial pentatricopeptide repeat-containing protein At1g20300, mitochondrial Pentatricopeptide repeat-containing protein mitochondrial pentatricopeptide repeat-containing protein At1g20300, mitochondrial pentatricopeptide repeat-containing protein At1g20300, mitochondrial pentatricopeptide repeat-containing protein At1g20300, mitochondrial pentatricopeptide repeat-containing protein At1g20300, mitochondrial pentatricopeptide repeat-containing protein At1g20300, mitochondrial pentatricopeptide repeat-containing protein At1g20300, mitochondrial
Coexmap

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Coexpression

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KEGG Info
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bra03008 Ribosome biogenesis in eukaryotes 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ath03008 Ribosome biogenesis in eukaryotes 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi03008 Ribosome biogenesis in eukaryotes 3
ghi00260 Glycine, serine and threonine metabolism 2
ghi00750 Vitamin B6 metabolism 2
ghi01230 Biosynthesis of amino acids 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cit03008 Ribosome biogenesis in eukaryotes 2
cit01240 Biosynthesis of cofactors 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma03040 Spliceosome 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ppo03008 Ribosome biogenesis in eukaryotes 5
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
mtr00970 Aminoacyl-tRNA biosynthesis 5
mtr03020 RNA polymerase 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sly03008 Ribosome biogenesis in eukaryotes 7
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta03040 Spliceosome 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
osa03013 Nucleocytoplasmic transport 3
osa03010 Ribosome 2
osa03008 Ribosome biogenesis in eukaryotes 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
zma03008 Ribosome biogenesis in eukaryotes 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae03008 Ribosome biogenesis in eukaryotes 6
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae03008 Ribosome biogenesis in eukaryotes 6
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
hvu03008 Ribosome biogenesis in eukaryotes 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sbi01230 Biosynthesis of amino acids 3
sbi01200 Carbon metabolism 3
sbi00260 Glycine, serine and threonine metabolism 2
sbi00270 Cysteine and methionine metabolism 2
sbi01240 Biosynthesis of cofactors 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bdi00240 Pyrimidine metabolism 2
bdi01240 Biosynthesis of cofactors 2
Expression Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern
Entrez Gene ID* 103872824 106347087 106433718 838618 107937578 102620543 100800850 100267650 7493998 11426023 101247520 102581822 107812790 4347743 100304366 123122429 123112909 123104648 123397684 8054986 100840473
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