ATTED-II : GeneCoexpression result

Species	Gene	Description
gma-u.5	100305917	KOW RNA-binding domain-containing protein
gma-r.7	100305917	KOW RNA-binding domain-containing protein
gma-u.5	100789294	50S ribosomal protein L24
gma-u.5	100499816	uncharacterized LOC100499816
mtr-u.5	25483103	50S ribosomal protein L24
ppo-u.5	7470189	uncharacterized LOC7470189
ath-u.5	AT5G23535	KOW domain-containing protein
bra-r.6	103874225	50S ribosomal protein L24
bra-r.6	103865527	50S ribosomal protein L24
vvi-u.5	100852679	uncharacterized LOC100852679
ghi-r.1	107922726	50S ribosomal protein L24
ghi-r.1	107923347	uncharacterized LOC107923347
ghi-r.1	107930539	50S ribosomal protein L24
bna-r.1	111207567	50S ribosomal protein L24
bna-r.1	106428430	50S ribosomal protein L24-like
bna-r.1	106364080	50S ribosomal protein L24
cit-r.1	102630763	uncharacterized LOC102630763
sly-u.5	101268212	uncharacterized LOC101268212
sot-r.1	102580372	50S ribosomal protein L24
sot-r.1	102590082	50S ribosomal protein L24-like
nta-r.1	107815419	uncharacterized LOC107815419
nta-r.1	107769620	uncharacterized LOC107769620
nta-r.1	107762564	uncharacterized LOC107762564
osa-u.5	4351443	uncharacterized LOC4351443
osa-u.5	4349726	uncharacterized LOC4349726
zma-u.5	100274273	50S ribosomal protein L24-like
tae-r.2	123086375	50S ribosomal protein L24
tae-r.2	123096597	50S ribosomal protein L24
tae-r.2	123091670	50S ribosomal protein L24
hvu-r.1	123448185	50S ribosomal protein L24
sbi-r.1	8071432	50S ribosomal protein L24
sbi-r.1	8085621	50S ribosomal protein L24
bdi-r.1	100842078	50S ribosomal protein L24
cre-r.1	CHLRE_07g330450v5	uncharacterized protein

Annotation

functional annotation

KEGG

gmx03010 [list] [network] Ribosome (1072 genes)

GO BP

GO:0006412 [list] [network] translation

(852 genes)

IEA

GO CC

GO:0005840 [list] [network] ribosome	(633 genes)	IEA
GO:0005739 [list] [network] mitochondrion	(1058 genes)	IEA

GO MF

GO:0003735 [list] [network] structural constituent of ribosome	(610 genes)	IEA
GO:0003723 [list] [network] RNA binding	(2019 genes)	IEA

Protein

NP_001238714.1 [sequence] [blastp]

Subcellular
localization
wolf

cyto 6, nucl 1, chlo 1, mito 1, E.R. 1, chlo_mito 1, cysk_nucl 1, nucl_plas 1

(predict for NP_001238714.1)

Subcellular
localization
TargetP

other 6, mito 4

(predict for NP_001238714.1)

Gene expression

All samples

[Expression pattern]

Tissue specificity^*

Coexpression

	Gene	Function	KEGG					Entrez Gene ID	Other ID	Link	Target		Reference
	Gene	Function	KEGG					Entrez Gene ID	Other ID	Link	gma-u.5 for 100305917	gma-r.7 for 100305917	gma-u.5 for 100789294	gma-u.5 for 100499816	mtr-u.5 for 25483103	ppo-u.5 for 7470189	ath-u.5 for AT5G23535	bra-r.6 for 103874225	bra-r.6 for 103865527	vvi-u.5 for 100852679	ghi-r.1 for 107922726	ghi-r.1 for 107923347	ghi-r.1 for 107930539	bna-r.1 for 111207567	bna-r.1 for 106428430	bna-r.1 for 106364080	cit-r.1 for 102630763	sly-u.5 for 101268212	sot-r.1 for 102580372	sot-r.1 for 102590082	nta-r.1 for 107815419	nta-r.1 for 107769620	nta-r.1 for 107762564	osa-u.5 for 4351443	osa-u.5 for 4349726	zma-u.5 for 100274273	tae-r.2 for 123086375	tae-r.2 for 123096597	tae-r.2 for 123091670	hvu-r.1 for 123448185	sbi-r.1 for 8071432	sbi-r.1 for 8085621	bdi-r.1 for 100842078	cre-r.1 for CHLRE_07g330450v5

Ortholog

Ortholog ID: 5839

Species

gma

mtr

ppo

ath

bra

vvi

ghi

bna

cit

sly

sot

nta

osa

zma

tae

hvu

sbi

bdi

cre

Symbol

Function^*

50S ribosomal protein L24

uncharacterized LOC100499816

50S ribosomal protein L24

uncharacterized LOC7470189

KOW domain-containing protein

50S ribosomal protein L24

uncharacterized LOC100852679

50S ribosomal protein L24

uncharacterized LOC107923347

50S ribosomal protein L24

50S ribosomal protein L24-like

uncharacterized LOC102630763

uncharacterized LOC101268212

50S ribosomal protein L24

50S ribosomal protein L24-like

uncharacterized LOC107815419

uncharacterized LOC107769620

uncharacterized LOC107762564

uncharacterized LOC4351443

uncharacterized LOC4349726

50S ribosomal protein L24-like

50S ribosomal protein L24

uncharacterized protein

Coexmap

Please wait a moment.

Coexpression

Please wait a moment.

KEGG Info

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
gma00190	Oxidative phosphorylation	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
gma03010	Ribosome	13

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
mtr03010	Ribosome	20

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
ppo03010	Ribosome	12
ppo03008	Ribosome biogenesis in eukaryotes	2
ppo03040	Spliceosome	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
ath03010	Ribosome	5

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
bra03010	Ribosome	16
bra03040	Spliceosome	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
bra03010	Ribosome	11
bra00564	Glycerophospholipid metabolism	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
vvi03010	Ribosome	18

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
ghi04141	Protein processing in endoplasmic reticulum	4
ghi04626	Plant-pathogen interaction	4
ghi03010	Ribosome	2
ghi00061	Fatty acid biosynthesis	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
ghi03010	Ribosome	6
ghi00061	Fatty acid biosynthesis	2
ghi03040	Spliceosome	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
ghi03010	Ribosome	14
ghi03008	Ribosome biogenesis in eukaryotes	4

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
bna03010	Ribosome	5

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
bna03010	Ribosome	9

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
bna03010	Ribosome	9

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
cit03010	Ribosome	6
cit03008	Ribosome biogenesis in eukaryotes	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
sly03010	Ribosome	11
sly03040	Spliceosome	4

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
sot03010	Ribosome	6
sot03040	Spliceosome	3
sot03020	RNA polymerase	2
sot03008	Ribosome biogenesis in eukaryotes	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
sot03010	Ribosome	12
sot03040	Spliceosome	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
nta03010	Ribosome	3
nta03020	RNA polymerase	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
nta03010	Ribosome	3
nta03040	Spliceosome	3

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
nta03010	Ribosome	3
nta03040	Spliceosome	3
nta03018	RNA degradation	2
nta03022	Basal transcription factors	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
osa03010	Ribosome	9

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
osa03010	Ribosome	7

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
zma03010	Ribosome	16
zma03008	Ribosome biogenesis in eukaryotes	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
tae03010	Ribosome	7
tae03020	RNA polymerase	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
tae03010	Ribosome	9

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
tae03010	Ribosome	7

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
hvu03010	Ribosome	13

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
sbi03010	Ribosome	18

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
sbi03010	Ribosome	14

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
bdi03010	Ribosome	14

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
cre00190	Oxidative phosphorylation	2
cre04145	Phagosome	2
cre03040	Spliceosome	2

Expression

Expression pattern

Entrez Gene ID^*

100789294

100499816

25483103

7470189

832419

103874225

103865527

100852679

107922726

107923347

107930539

106428430

106348325

125577738

102630763

101268212

102580372

102590082

107815419

107769620

107762564

4351443

4349726

100274273

123086375

123096597

123091670

123448185

8071432

8085621

100842078

5716174

Select Species^**

Orthologous genes in OrthoFinder^**

Top 50 coexpressed genes to 100305917 (gma-u.5 coexpression data)

Top 50 enrichment test to 100305917 (gma-u.5 coexpression data)


Species	gma	mtr	ppo	ath	bra	vvi	ghi	bna	cit	sly	sot	nta	osa	zma	tae	hvu	sbi	bdi	cre
Paralog	4	1	1	1	2	1	3	3	1	1	2	3	2	1	3	1	2	1	1

Select Species**

Orthologous genes in OrthoFinder**

Top 50 coexpressed genes to 100305917 (gma-u.5 coexpression data)

Top 50 enrichment test to 100305917 (gma-u.5 coexpression data)

Select Species^**

Orthologous genes in OrthoFinder^**