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Orthologous genes in OrthoFinder**

Species Gene Description
 zma-u.5   100382188   Polynucleotidyl transferase ribonuclease H-like superfamily protein 
 zma-r.6   100382188   Polynucleotidyl transferase ribonuclease H-like superfamily protein 
 zma-m.5   100382188   Polynucleotidyl transferase ribonuclease H-like superfamily protein 
 sbi-r.1   8070003   RNA exonuclease 4 
 osa-u.5   4345430   uncharacterized LOC4345430 
 tae-r.2   123160197   RNA exonuclease 4 
 tae-r.2   123147453   RNA exonuclease 4 
 tae-r.2   123167485   RNA exonuclease 4 
 hvu-r.1   123412897   RNA exonuclease 4 
 bdi-r.1   100827294   RNA exonuclease 4 
 ath-u.5   AT3G15080   Polynucleotidyl transferase, ribonuclease H-like superfamily protein 
 gma-u.5   100819122   RNA exonuclease 4 
 gma-u.5   100811497   RNA exonuclease 4 
 sly-u.5   101255368   uncharacterized LOC101255368 
 bra-r.6   103869958   RNA exonuclease 4 
 vvi-u.5   100241776   uncharacterized LOC100241776 
 ppo-u.5   7485140   RNA exonuclease 4 
 mtr-u.5   25487285   RNA exonuclease 4 
 ghi-r.1   107918409   RNA exonuclease 4 
 ghi-r.1   107895248   RNA exonuclease 4 
 bna-r.1   106397474   RNA exonuclease 4 
 bna-r.1   111206533   RNA exonuclease 4 
 sot-r.1   102581139   RNA exonuclease 4 
 cit-r.1   102624058   RNA exonuclease 4 
 nta-r.1   107814025   uncharacterized LOC107814025 
 nta-r.1   107799784   uncharacterized LOC107799784 
 cre-r.1   CHLRE_11g480060v5   uncharacterized protein 

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Top 50 coexpressed genes to 100382188 (zma-u.5 coexpression data)

 KEGG ID   Pathway name   #genes in coex list   #genes in genome   -log10(p)   Link to the KEGG* map 
(Multiple genes)

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Top 50 enrichment test to 100382188 (zma-u.5 coexpression data)

CoexMap"100382188"


zmaLOC100382188 | Entrez gene ID : 100382188      
Species zma sbi osa tae hvu bdi ath gma sly bra vvi ppo mtr ghi bna sot cit nta cre
Paralog 3 1 1 3 1 1 1 2 1 1 1 1 1 2 2 1 1 2 1
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CoexMap
Chloroplast
Nucleus

functional annotation
KEGG
GO BP
GO:0006364 [list] [network] rRNA processing  (222 genes)  IEA  
GO CC
GO:0005634 [list] [network] nucleus  (3371 genes)  IEA  
GO MF
GO:0008408 [list] [network] 3'-5' exonuclease activity  (83 genes)  IEA  
GO:0003676 [list] [network] nucleic acid binding  (4170 genes)  IEA  
Protein NP_001168418.1 [sequence] [blastp]
XP_008643823.1 [sequence] [blastp]
Subcellular
localization
wolf
chlo 9,  nucl 1,  cyto 1,  cyto_nucl 1  (predict for NP_001168418.1)
chlo 8,  nucl 1  (predict for XP_008643823.1)
Subcellular
localization
TargetP
chlo 9  (predict for NP_001168418.1)
chlo 9  (predict for XP_008643823.1)
Gene expression
All samples [Expression pattern]
Tissue specificity*
Show Coexpressed Genes
Gene Function KEGG Entrez
Gene
ID		 Other ID Link Target Reference

zma-u.5
for
100382188
zma-r.6
for
100382188
zma-m.5
for
100382188
sbi-r.1
for
8070003
osa-u.5
for
4345430
tae-r.2
for
123160197
tae-r.2
for
123147453
tae-r.2
for
123167485
hvu-r.1
for
123412897
bdi-r.1
for
100827294
ath-u.5
for
AT3G15080
gma-u.5
for
100819122
gma-u.5
for
100811497
sly-u.5
for
101255368
bra-r.6
for
103869958
vvi-u.5
for
100241776
ppo-u.5
for
7485140
mtr-u.5
for
25487285
ghi-r.1
for
107918409
ghi-r.1
for
107895248
bna-r.1
for
106397474
bna-r.1
for
111206533
sot-r.1
for
102581139
cit-r.1
for
102624058
nta-r.1
for
107814025
nta-r.1
for
107799784
cre-r.1
for
CHLRE_11g480060v5


Ortholog ID: 10082
Species zma sbi osa tae tae tae hvu bdi ath gma gma sly bra vvi ppo mtr ghi ghi bna bna sot cit nta nta cre
Symbol LOC100382188 LOC8070003 LOC4345430 LOC123160197 LOC123147453 LOC123167485 LOC123412897 LOC100827294 AT3G15080 LOC100819122 LOC100811497 LOC101255368 LOC103869958 LOC100241776 LOC7485140 LOC25487285 LOC107918409 LOC107895248 LOC106397474 LOC111206533 LOC102581139 LOC102624058 LOC107814025 LOC107799784 CHLRE_11g480060v5
Function* Polynucleotidyl transferase ribonuclease H-like superfamily protein RNA exonuclease 4 uncharacterized LOC4345430 RNA exonuclease 4 RNA exonuclease 4 RNA exonuclease 4 RNA exonuclease 4 RNA exonuclease 4 Polynucleotidyl transferase, ribonuclease H-like superfamily protein RNA exonuclease 4 RNA exonuclease 4 uncharacterized LOC101255368 RNA exonuclease 4 uncharacterized LOC100241776 RNA exonuclease 4 RNA exonuclease 4 RNA exonuclease 4 RNA exonuclease 4 RNA exonuclease 4 RNA exonuclease 4 RNA exonuclease 4 RNA exonuclease 4 uncharacterized LOC107814025 uncharacterized LOC107799784 uncharacterized protein
Coexmap

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Coexpression

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KEGG Info
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
zma03008 Ribosome biogenesis in eukaryotes 4
zma03010 Ribosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sbi00970 Aminoacyl-tRNA biosynthesis 4
sbi03008 Ribosome biogenesis in eukaryotes 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
osa03008 Ribosome biogenesis in eukaryotes 2
osa03013 Nucleocytoplasmic transport 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae00230 Purine metabolism 3
tae00670 One carbon pool by folate 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae00230 Purine metabolism 3
tae00670 One carbon pool by folate 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae00650 Butanoate metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
hvu03040 Spliceosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bdi04626 Plant-pathogen interaction 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ath03008 Ribosome biogenesis in eukaryotes 2
ath03020 RNA polymerase 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma03050 Proteasome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sly03040 Spliceosome 5
sly03018 RNA degradation 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bra03008 Ribosome biogenesis in eukaryotes 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
vvi03008 Ribosome biogenesis in eukaryotes 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
mtr03010 Ribosome 13
mtr03040 Spliceosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi03040 Spliceosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi03040 Spliceosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna03018 RNA degradation 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna03018 RNA degradation 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sot03008 Ribosome biogenesis in eukaryotes 7
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta03040 Spliceosome 3
nta04122 Sulfur relay system 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta04122 Sulfur relay system 2
nta03040 Spliceosome 2
Expression Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern
Entrez Gene ID* 100382188 8070003 4345430 123160197 123147453 123167485 123412897 100827294 820738 100819122 100811497 101255368 103869958 100241776 7485140 25487285 107918409 107895248 106397474 111206533 102581139 102624058 107814025 107799784 5722921
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