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Orthologous genes in OrthoFinder**

Species Gene Description
 bna-r.1   106397474   RNA exonuclease 4 
 ath-u.5   AT3G15080   Polynucleotidyl transferase, ribonuclease H-like superfamily protein 
 gma-u.5   100819122   RNA exonuclease 4 
 gma-u.5   100811497   RNA exonuclease 4 
 vvi-u.5   100241776   uncharacterized LOC100241776 
 ppo-u.5   7485140   RNA exonuclease 4 
 mtr-u.5   25487285   RNA exonuclease 4 
 sly-u.5   101255368   uncharacterized LOC101255368 
 osa-u.5   4345430   uncharacterized LOC4345430 
 zma-u.5   100382188   Polynucleotidyl transferase ribonuclease H-like superfamily protein 

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Top 50 coexpressed genes to 106397474 (bna-r.1 coexpression data)

 KEGG ID   Pathway name   #genes in coex list   #genes in genome   -log10(p)   Link to the KEGG* map 
(Multiple genes)

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Top 50 enrichment test to 106397474 (bna-r.1 coexpression data)

CoexMap"106397474"


bnaLOC106397474 | Entrez gene ID : 106397474    
Species bna ath gma vvi ppo mtr sly osa zma sbi nta bra cre hvu cit bdi sot tae ghi
Paralog 1 1 2 1 1 1 1 1 1 0 0 0 0 0 0 0 0 0 0
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CoexMap
Chloroplast
Nucleus

functional annotation
KEGG
GO BP
GO:0006364 [list] [network] rRNA processing  (647 genes)  IEA  
GO CC
GO:0005634 [list] [network] nucleus  (9971 genes)  IEA  
GO MF
GO:0008408 [list] [network] 3'-5' exonuclease activity  (171 genes)  IEA  
GO:0003676 [list] [network] nucleic acid binding  (12766 genes)  IEA  
Protein XP_013693513.2 [sequence] [blastp]
Subcellular
localization
wolf
chlo 4,  nucl 4,  mito 1,  cyto 1,  plas 1,  cyto_mito 1,  cyto_plas 1  (predict for XP_013693513.2)
Subcellular
localization
TargetP
chlo 6  (predict for XP_013693513.2)
Gene expression
All samples [Expression pattern]
Tissue specificity*
Show Coexpressed Genes
Gene Function KEGG Entrez
Gene
ID		 Other ID Link Target Reference

bna-r.1
for
106397474

.
ath-u.5
for
AT3G15080

.
gma-u.5
for
100819122

.
gma-u.5
for
100811497

.
vvi-u.5
for
100241776

.
ppo-u.5
for
7485140

.
mtr-u.5
for
25487285

.
sly-u.5
for
101255368

.
osa-u.5
for
4345430

.
zma-u.5
for
100382188

.


Ortholog ID: 10082
Species ath gma gma sly osa zma bra vvi ppo mtr tae tae hvu ghi ghi bna bna cre sbi sot cit bdi nta nta
Symbol AT3G15080 LOC100819122 LOC100811497 LOC101255368 LOC4345430 LOC100382188 LOC103869958 LOC100241776 LOC7485140 LOC25487285 LOC123160197 LOC123147453 LOC123412897 LOC107918409 LOC107895248 LOC106397474 LOC111206533 CHLRE_11g480060v5 LOC8070003 LOC102581139 LOC102624058 LOC100827294 LOC107814025 LOC107799784
Function* Polynucleotidyl transferase, ribonuclease H-like superfamily protein RNA exonuclease 4 RNA exonuclease 4 uncharacterized LOC101255368 uncharacterized LOC4345430 Polynucleotidyl transferase ribonuclease H-like superfamily protein RNA exonuclease 4 uncharacterized LOC100241776 RNA exonuclease 4 RNA exonuclease 4 RNA exonuclease 4 RNA exonuclease 4 RNA exonuclease 4 RNA exonuclease 4 RNA exonuclease 4 RNA exonuclease 4 RNA exonuclease 4 uncharacterized protein RNA exonuclease 4 RNA exonuclease 4 RNA exonuclease 4 RNA exonuclease 4 uncharacterized LOC107814025 uncharacterized LOC107799784
Coexmap

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Coexpression

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KEGG Info
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ath03008 Ribosome biogenesis in eukaryotes 2
ath03020 RNA polymerase 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma03050 Proteasome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sly03040 Spliceosome 5
sly03018 RNA degradation 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
osa03008 Ribosome biogenesis in eukaryotes 2
osa03013 Nucleocytoplasmic transport 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
zma03008 Ribosome biogenesis in eukaryotes 4
zma03010 Ribosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bra03008 Ribosome biogenesis in eukaryotes 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
vvi03008 Ribosome biogenesis in eukaryotes 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
mtr03010 Ribosome 13
mtr03040 Spliceosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae00230 Purine metabolism 3
tae00670 One carbon pool by folate 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae00230 Purine metabolism 3
tae00670 One carbon pool by folate 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
hvu03040 Spliceosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi03040 Spliceosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi03040 Spliceosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna03018 RNA degradation 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna03018 RNA degradation 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sbi00970 Aminoacyl-tRNA biosynthesis 4
sbi03008 Ribosome biogenesis in eukaryotes 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sot03008 Ribosome biogenesis in eukaryotes 7
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bdi04626 Plant-pathogen interaction 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta03040 Spliceosome 3
nta04122 Sulfur relay system 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta04122 Sulfur relay system 2
nta03040 Spliceosome 2
Expression Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern
Entrez Gene ID* 820738 100819122 100811497 101255368 4345430 100382188 103869958 100241776 7485140 25487285 123160197 123147453 123412897 107918409 107895248 106397474 111206533 5722921 8070003 102581139 102624058 100827294 107814025 107799784
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