Select Species**


OK


Orthologous genes in OrthoFinder**

Species Gene Description
 zma-u.5   100382481   putative regulator of chromosome condensation (RCC1) family protein 
 zma-r.6   100382481   putative regulator of chromosome condensation (RCC1) family protein 
 zma-m.5   100382481   putative regulator of chromosome condensation (RCC1) family protein 
 zma-u.5   103647289   ultraviolet-B receptor UVR8 
 sbi-r.1   110432859   ultraviolet-B receptor UVR8 
 osa-u.5   4343161   ultraviolet-B receptor UVR8 
 tae-r.2   123044788   ultraviolet-B receptor UVR8 
 tae-r.2   123052738   ultraviolet-B receptor UVR8 
 tae-r.2   123188575   ultraviolet-B receptor UVR8 
 hvu-r.1   123426095   ultraviolet-B receptor UVR8 
 bdi-r.1   100839797   PH, RCC1 and FYVE domains-containing protein 1 
 ath-u.5   AT3G15430   Regulator of chromosome condensation (RCC1) family protein 
 gma-u.5   100782653   PH, RCC1 and FYVE domains-containing protein 1 
 gma-u.5   100786672   ultraviolet-B receptor UVR8 
 sly-u.5   101251010   ultraviolet-B receptor UVR8 
 bra-r.6   103869920   probable E3 ubiquitin-protein ligase HERC3 
 bra-r.6   103841435   ultraviolet-B receptor UVR8 
 vvi-u.5   100262257   ultraviolet-B receptor UVR8 
 ppo-u.5   18095609   PH, RCC1 and FYVE domains-containing protein 1 
 ppo-u.5   7462343   ultraviolet-B receptor UVR8 
 mtr-u.5   25487365   probable E3 ubiquitin-protein ligase HERC4 
 ghi-r.1   107903556   probable E3 ubiquitin-protein ligase HERC3 
 ghi-r.1   107948634   probable E3 ubiquitin-protein ligase HERC3 
 bna-r.1   106380710   ultraviolet-B receptor UVR8-like 
 bna-r.1   106406096   probable E3 ubiquitin-protein ligase HERC3 
 bna-r.1   111205371   ultraviolet-B receptor UVR8 
 sot-r.1   102584399   ultraviolet-B receptor UVR8 
 cit-r.1   102616128   PH, RCC1 and FYVE domains-containing protein 1 
 nta-r.1   107822820   ultraviolet-B receptor UVR8 
 nta-r.1   107797102   ultraviolet-B receptor UVR8 

close


Top 50 coexpressed genes to 100382481 (zma-u.5 coexpression data)

 KEGG ID   Pathway name   #genes in coex list   #genes in genome   -log10(p)   Link to the KEGG* map 
(Multiple genes)

close

close

Top 50 enrichment test to 100382481 (zma-u.5 coexpression data)

CoexMap"100382481"


zmaLOC100382481 | Entrez gene ID : 100382481      
Species zma sbi osa tae hvu bdi ath gma sly bra vvi ppo mtr ghi bna sot cit nta cre
Paralog 4 1 1 3 1 1 1 2 1 2 1 2 1 2 3 1 1 2 0
Show/Hide Columns:        



CoexMap
Chloroplast
Nucleus

functional annotation
KEGG
GO BP
GO CC
GO MF
Protein NP_001168691.1 [sequence] [blastp]
Subcellular
localization
wolf
chlo 5,  nucl 3,  mito 1,  cyto_nucl 1,  cysk_nucl 1  (predict for NP_001168691.1)
Subcellular
localization
TargetP
other 9  (predict for NP_001168691.1)
Gene expression
All samples [Expression pattern]
Tissue specificity*
Show Coexpressed Genes
Gene Function KEGG Entrez
Gene
ID		 Other ID Link Target Reference

zma-u.5
for
100382481
zma-r.6
for
100382481
zma-m.5
for
100382481
zma-u.5
for
103647289
sbi-r.1
for
110432859
osa-u.5
for
4343161
tae-r.2
for
123044788
tae-r.2
for
123052738
tae-r.2
for
123188575
hvu-r.1
for
123426095
bdi-r.1
for
100839797
ath-u.5
for
AT3G15430
gma-u.5
for
100782653
gma-u.5
for
100786672
sly-u.5
for
101251010
bra-r.6
for
103869920
bra-r.6
for
103841435
vvi-u.5
for
100262257
ppo-u.5
for
18095609
ppo-u.5
for
7462343
mtr-u.5
for
25487365
ghi-r.1
for
107903556
ghi-r.1
for
107948634
bna-r.1
for
106380710
bna-r.1
for
106406096
bna-r.1
for
111205371
sot-r.1
for
102584399
cit-r.1
for
102616128
nta-r.1
for
107822820
nta-r.1
for
107797102


Ortholog ID: 8004
Species zma zma sbi osa tae tae tae hvu bdi ath gma gma sly bra bra vvi ppo ppo mtr ghi ghi bna bna bna sot cit nta nta
Symbol LOC100382481 LOC103647289 LOC110432859 LOC4343161 LOC123044788 LOC123052738 LOC123188575 LOC123426095 LOC100839797 AT3G15430 LOC100782653 LOC100786672 LOC101251010 LOC103869920 LOC103841435 LOC100262257 LOC18095609 LOC7462343 LOC25487365 LOC107903556 LOC107948634 LOC106380710 LOC106406096 LOC106401338 LOC102584399 LOC102616128 LOC107822820 LOC107797102
Function* putative regulator of chromosome condensation (RCC1) family protein ultraviolet-B receptor UVR8 ultraviolet-B receptor UVR8 ultraviolet-B receptor UVR8 ultraviolet-B receptor UVR8 ultraviolet-B receptor UVR8 ultraviolet-B receptor UVR8 ultraviolet-B receptor UVR8 PH, RCC1 and FYVE domains-containing protein 1 Regulator of chromosome condensation (RCC1) family protein PH, RCC1 and FYVE domains-containing protein 1 ultraviolet-B receptor UVR8 ultraviolet-B receptor UVR8 probable E3 ubiquitin-protein ligase HERC3 ultraviolet-B receptor UVR8 ultraviolet-B receptor UVR8 PH, RCC1 and FYVE domains-containing protein 1 ultraviolet-B receptor UVR8 probable E3 ubiquitin-protein ligase HERC4 probable E3 ubiquitin-protein ligase HERC3 probable E3 ubiquitin-protein ligase HERC3 ultraviolet-B receptor UVR8-like probable E3 ubiquitin-protein ligase HERC3 ultraviolet-B receptor UVR8-like ultraviolet-B receptor UVR8 PH, RCC1 and FYVE domains-containing protein 1 ultraviolet-B receptor UVR8 ultraviolet-B receptor UVR8
Coexmap

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.
Coexpression

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.
KEGG Info
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sbi00520 Amino sugar and nucleotide sugar metabolism 2
sbi01250 Biosynthesis of nucleotide sugars 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae04136 Autophagy - other 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
hvu03040 Spliceosome 3
hvu03015 mRNA surveillance pathway 2
hvu04120 Ubiquitin mediated proteolysis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ath04144 Endocytosis 3
ath03050 Proteasome 3
ath04141 Protein processing in endoplasmic reticulum 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma04141 Protein processing in endoplasmic reticulum 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma04016 MAPK signaling pathway - plant 2
gma04075 Plant hormone signal transduction 2
gma04141 Protein processing in endoplasmic reticulum 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sly03050 Proteasome 9
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
vvi04075 Plant hormone signal transduction 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ppo03040 Spliceosome 3
ppo03060 Protein export 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
mtr00999 Biosynthesis of various plant secondary metabolites 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi00510 N-Glycan biosynthesis 2
ghi00513 Various types of N-glycan biosynthesis 2
ghi03272 Virion - Hepatitis viruses 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi00510 N-Glycan biosynthesis 2
ghi00513 Various types of N-glycan biosynthesis 2
ghi03272 Virion - Hepatitis viruses 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sot03050 Proteasome 5
sot03015 mRNA surveillance pathway 4
sot04136 Autophagy - other 4
sot04382 Cornified envelope formation 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cit03050 Proteasome 2
Expression Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern
Entrez Gene ID* 100382481 103647289 110432859 4343161 123044788 123052738 123188575 123426095 100839797 820782 100782653 100786672 101251010 103869920 103841435 100262257 18095609 7462343 25487365 107903556 107948634 106380710 106406096 106401338 102584399 102616128 107822820 107797102
The preparation time of this page was 0.2 [sec].