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Orthologous genes in OrthoFinder**

Species Gene Description
 ghi-r.1   107948634   probable E3 ubiquitin-protein ligase HERC3 
 ath-u.5   AT3G15430   Regulator of chromosome condensation (RCC1) family protein 
 gma-u.5   100782653   PH, RCC1 and FYVE domains-containing protein 1 
 gma-u.5   100786672   ultraviolet-B receptor UVR8 
 vvi-u.5   100262257   ultraviolet-B receptor UVR8 
 ppo-u.5   18095609   PH, RCC1 and FYVE domains-containing protein 1 
 ppo-u.5   7462343   ultraviolet-B receptor UVR8 
 mtr-u.5   25487365   probable E3 ubiquitin-protein ligase HERC4 
 sly-u.5   101251010   ultraviolet-B receptor UVR8 
 osa-u.5   4343161   ultraviolet-B receptor UVR8 
 zma-u.5   103647289   ultraviolet-B receptor UVR8 
 zma-u.5   100382481   putative regulator of chromosome condensation (RCC1) family protein 

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Top 50 coexpressed genes to 107948634 (ghi-r.1 coexpression data)

 KEGG ID   Pathway name   #genes in coex list   #genes in genome   -log10(p)   Link to the KEGG* map 
(Multiple genes)

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Top 50 enrichment test to 107948634 (ghi-r.1 coexpression data)

CoexMap"107948634"


ghiLOC107948634 | Entrez gene ID : 107948634    
Species ghi ath gma vvi ppo mtr sly osa zma bdi hvu bra cit bna sbi sot nta cre tae
Paralog 1 1 2 1 2 1 1 1 2 0 0 0 0 0 0 0 0 0 0
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CoexMap
Chloroplast
Nucleus

functional annotation
KEGG
GO BP
GO CC
GO MF
Protein XP_016738747.1 [sequence] [blastp]
Subcellular
localization
wolf
nucl 6,  cysk 1,  chlo 1,  cyto 1,  mito 1,  golg 1,  chlo_mito 1,  cysk_plas 1  (predict for XP_016738747.1)
Subcellular
localization
TargetP
other 6  (predict for XP_016738747.1)
Gene expression
All samples [Expression pattern]
Tissue specificity*
Show Coexpressed Genes
Gene Function KEGG Entrez
Gene
ID		 Other ID Link Target Reference

ghi-r.1
for
107948634
ath-u.5
for
AT3G15430
gma-u.5
for
100782653
gma-u.5
for
100786672
vvi-u.5
for
100262257
ppo-u.5
for
18095609
ppo-u.5
for
7462343
mtr-u.5
for
25487365
sly-u.5
for
101251010
osa-u.5
for
4343161
zma-u.5
for
103647289
zma-u.5
for
100382481


Ortholog ID: 8004
Species ghi ghi ath bra bra bna bna cit gma gma vvi ppo ppo mtr sly sot nta nta osa zma zma tae tae hvu sbi bdi
Symbol LOC107903556 LOC107948634 AT3G15430 LOC103841435 LOC103869920 LOC106401338 LOC106380710 LOC102616128 LOC100782653 LOC100786672 LOC100262257 LOC7462343 LOC18095609 LOC25487365 LOC101251010 LOC102584399 LOC107797102 LOC107822820 LOC4343161 LOC100382481 LOC103647289 LOC123188575 LOC123044788 LOC123426095 LOC110432859 LOC100839797
Function* probable E3 ubiquitin-protein ligase HERC3 probable E3 ubiquitin-protein ligase HERC3 Regulator of chromosome condensation (RCC1) family protein ultraviolet-B receptor UVR8 probable E3 ubiquitin-protein ligase HERC3 ultraviolet-B receptor UVR8-like ultraviolet-B receptor UVR8-like PH, RCC1 and FYVE domains-containing protein 1 PH, RCC1 and FYVE domains-containing protein 1 ultraviolet-B receptor UVR8 ultraviolet-B receptor UVR8 ultraviolet-B receptor UVR8 PH, RCC1 and FYVE domains-containing protein 1 probable E3 ubiquitin-protein ligase HERC4 ultraviolet-B receptor UVR8 ultraviolet-B receptor UVR8 ultraviolet-B receptor UVR8 ultraviolet-B receptor UVR8 ultraviolet-B receptor UVR8 putative regulator of chromosome condensation (RCC1) family protein ultraviolet-B receptor UVR8 ultraviolet-B receptor UVR8 ultraviolet-B receptor UVR8 ultraviolet-B receptor UVR8 ultraviolet-B receptor UVR8 PH, RCC1 and FYVE domains-containing protein 1
Coexmap

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Coexpression

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KEGG Info
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi00510 N-Glycan biosynthesis 2
ghi00513 Various types of N-glycan biosynthesis 2
ghi03272 Virion - Hepatitis viruses 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi00510 N-Glycan biosynthesis 2
ghi00513 Various types of N-glycan biosynthesis 2
ghi03272 Virion - Hepatitis viruses 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ath04144 Endocytosis 3
ath03050 Proteasome 3
ath04141 Protein processing in endoplasmic reticulum 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cit03050 Proteasome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma04141 Protein processing in endoplasmic reticulum 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma04016 MAPK signaling pathway - plant 2
gma04075 Plant hormone signal transduction 2
gma04141 Protein processing in endoplasmic reticulum 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
vvi04075 Plant hormone signal transduction 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ppo03040 Spliceosome 3
ppo03060 Protein export 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
mtr00999 Biosynthesis of various plant secondary metabolites 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sly03050 Proteasome 9
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sot03050 Proteasome 5
sot03015 mRNA surveillance pathway 4
sot04136 Autophagy - other 4
sot04382 Cornified envelope formation 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
hvu03040 Spliceosome 3
hvu03015 mRNA surveillance pathway 2
hvu04120 Ubiquitin mediated proteolysis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sbi00520 Amino sugar and nucleotide sugar metabolism 2
sbi01250 Biosynthesis of nucleotide sugars 2
Expression Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern
Entrez Gene ID* 107903556 107948634 820782 103841435 103869920 106401338 106380710 102616128 100782653 100786672 100262257 7462343 18095609 25487365 101251010 102584399 107797102 107822820 4343161 100382481 103647289 123188575 123044788 123426095 110432859 100839797
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