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Orthologous genes in OrthoFinder**

Species Gene Description
 zma-u.5   100384484   Tetratricopeptide-like helical 
 zma-r.6   100384484   Tetratricopeptide-like helical 
 sbi-r.1   8076792   pentatricopeptide repeat-containing protein At3g12770 
 osa-u.5   4350219   pentatricopeptide repeat-containing protein At3g12770 
 hvu-r.1   123447821   pentatricopeptide repeat-containing protein At3g12770-like 
 bdi-r.1   104584572   pentatricopeptide repeat-containing protein At3g12770 
 sly-u.5   101246712   pentatricopeptide repeat-containing protein At2g29760, chloroplastic-like 
 vvi-u.5   100249213   pentatricopeptide repeat-containing protein At1g11290, chloroplastic 
 vvi-u.5   100259519   pentatricopeptide repeat-containing protein At1g08070, chloroplastic 
 sot-r.1   102578352   pentatricopeptide repeat-containing protein At2g29760, chloroplastic-like 
 nta-r.1   107790744   pentatricopeptide repeat-containing protein At1g11290, chloroplastic-like 
 nta-r.1   107823206   pentatricopeptide repeat-containing protein At1g11290, chloroplastic-like 

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Top 50 coexpressed genes to 100384484 (zma-u.5 coexpression data)

 KEGG ID   Pathway name   #genes in coex list   #genes in genome   -log10(p)   Link to the KEGG* map 
(Multiple genes)

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Top 50 enrichment test to 100384484 (zma-u.5 coexpression data)

CoexMap"100384484"


zmaLOC100384484 | Entrez gene ID : 100384484      
Species zma sbi osa hvu bdi sly vvi sot nta gma bra cre ppo ghi cit ath tae mtr bna
Paralog 2 1 1 1 1 1 2 1 2 0 0 0 0 0 0 0 0 0 0
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CoexMap
Chloroplast
Nucleus

functional annotation
KEGG
GO BP
GO:0009451 [list] [network] RNA modification  (350 genes)  IEA  
GO CC
GO MF
GO:0003723 [list] [network] RNA binding  (1549 genes)  IEA  
GO:0005515 [list] [network] protein binding  (4389 genes)  IEA  
Protein NP_001170485.1 [sequence] [blastp]
XP_008677694.1 [sequence] [blastp]
XP_008677695.1 [sequence] [blastp]
Subcellular
localization
wolf
chlo 9,  mito 1  (predict for NP_001170485.1)
chlo 9,  mito 1  (predict for XP_008677694.1)
chlo 9,  mito 1  (predict for XP_008677695.1)
Subcellular
localization
TargetP
other 4,  mito 3  (predict for NP_001170485.1)
other 4,  mito 3  (predict for XP_008677694.1)
other 4,  mito 3  (predict for XP_008677695.1)
Gene expression
All samples [Expression pattern]
Tissue specificity*
Show Coexpressed Genes
Gene Function KEGG Entrez
Gene
ID		 Other ID Link Target Reference

zma-u.5
for
100384484
zma-r.6
for
100384484
sbi-r.1
for
8076792
osa-u.5
for
4350219
hvu-r.1
for
123447821
bdi-r.1
for
104584572
sly-u.5
for
101246712
vvi-u.5
for
100249213
vvi-u.5
for
100259519
sot-r.1
for
102578352
nta-r.1
for
107790744
nta-r.1
for
107823206


Ortholog ID: 13866
Species zma sbi osa hvu bdi sly vvi vvi sot nta nta
Symbol LOC100384484 LOC8076792 LOC4350219 LOC123447821 LOC104584572 LOC101246712 LOC100249213 LOC100259519 LOC102578352 LOC107790744 LOC107823206
Function* Tetratricopeptide-like helical pentatricopeptide repeat-containing protein At3g12770 pentatricopeptide repeat-containing protein At3g12770 pentatricopeptide repeat-containing protein At3g12770-like pentatricopeptide repeat-containing protein At3g12770 pentatricopeptide repeat-containing protein At2g29760, chloroplastic-like pentatricopeptide repeat-containing protein At1g11290, chloroplastic pentatricopeptide repeat-containing protein At1g08070, chloroplastic pentatricopeptide repeat-containing protein At2g29760, chloroplastic-like pentatricopeptide repeat-containing protein At1g11290, chloroplastic-like pentatricopeptide repeat-containing protein At1g11290, chloroplastic-like
Coexmap

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Coexpression

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KEGG Info
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sbi03083 Polycomb repressive complex 3
sbi04120 Ubiquitin mediated proteolysis 3
sbi04141 Protein processing in endoplasmic reticulum 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
osa00240 Pyrimidine metabolism 3
osa01232 Nucleotide metabolism 3
osa00230 Purine metabolism 2
osa00480 Glutathione metabolism 2
Expression Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern
Entrez Gene ID* 100384484 8076792 4350219 123447821 104584572 101246712 100249213 100259519 102578352 107790744 107823206
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