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Orthologous genes in OrthoFinder**

Species Gene Description
 sbi-r.1   8076792   pentatricopeptide repeat-containing protein At3g12770 
 zma-u.5   100384484   Tetratricopeptide-like helical 
 osa-u.5   4350219   pentatricopeptide repeat-containing protein At3g12770 
 sly-u.5   101246712   pentatricopeptide repeat-containing protein At2g29760, chloroplastic-like 
 vvi-u.5   100249213   pentatricopeptide repeat-containing protein At1g11290, chloroplastic 
 vvi-u.5   100259519   pentatricopeptide repeat-containing protein At1g08070, chloroplastic 

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Top 50 coexpressed genes to 8076792 (sbi-r.1 coexpression data)

 KEGG ID   Pathway name   #genes in coex list   #genes in genome   -log10(p)   Link to the KEGG* map 
(Multiple genes)

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Top 50 enrichment test to 8076792 (sbi-r.1 coexpression data)

CoexMap"8076792"


sbiLOC8076792 | Entrez gene ID : 8076792    
Species sbi zma osa sly vvi ppo hvu mtr sot tae nta bra cit gma ghi bna bdi ath cre
Paralog 1 1 1 1 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0
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CoexMap
Chloroplast
Nucleus

functional annotation
KEGG
GO BP
GO:0009451 [list] [network] RNA modification  (378 genes)  IEA  
GO CC
GO MF
GO:0003723 [list] [network] RNA binding  (1243 genes)  IEA  
GO:0005515 [list] [network] protein binding  (4172 genes)  IEA  
Protein XP_002449224.1 [sequence] [blastp]
Subcellular
localization
wolf
chlo 8,  mito 1,  extr 1,  vacu 1  (predict for XP_002449224.1)
Subcellular
localization
TargetP
scret 3  (predict for XP_002449224.1)
Gene expression
All samples [Expression pattern]
Tissue specificity*
Show Coexpressed Genes
Gene Function KEGG Entrez
Gene
ID		 Other ID Link Target Reference

sbi-r.1
for
8076792

.
zma-u.5
for
100384484

.
osa-u.5
for
4350219

.
sly-u.5
for
101246712

.
vvi-u.5
for
100249213

.
vvi-u.5
for
100259519

.


Ortholog ID: 13866
Species sly osa zma vvi vvi hvu sbi sot bdi nta nta
Symbol LOC101246712 LOC4350219 LOC100384484 LOC100249213 LOC100259519 LOC123447821 LOC8076792 LOC102578352 LOC104584572 LOC107823206 LOC107790744
Function* pentatricopeptide repeat-containing protein At2g29760, chloroplastic-like pentatricopeptide repeat-containing protein At3g12770 Tetratricopeptide-like helical pentatricopeptide repeat-containing protein At1g11290, chloroplastic pentatricopeptide repeat-containing protein At1g08070, chloroplastic pentatricopeptide repeat-containing protein At3g12770-like pentatricopeptide repeat-containing protein At3g12770 pentatricopeptide repeat-containing protein At2g29760, chloroplastic-like pentatricopeptide repeat-containing protein At3g12770 pentatricopeptide repeat-containing protein At1g11290, chloroplastic-like pentatricopeptide repeat-containing protein At1g11290, chloroplastic-like
Coexmap

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Coexpression

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KEGG Info
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
osa00240 Pyrimidine metabolism 3
osa01232 Nucleotide metabolism 3
osa00230 Purine metabolism 2
osa00480 Glutathione metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sbi03083 Polycomb repressive complex 3
sbi04120 Ubiquitin mediated proteolysis 3
sbi04141 Protein processing in endoplasmic reticulum 3
Expression Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern
Entrez Gene ID* 101246712 4350219 100384484 100249213 100259519 123447821 8076792 102578352 104584572 107823206 107790744
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