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Orthologous genes in OrthoFinder**

Species Gene Description
 nta-r.1   107823206   pentatricopeptide repeat-containing protein At1g11290, chloroplastic-like 
 nta-r.1   107790744   pentatricopeptide repeat-containing protein At1g11290, chloroplastic-like 
 sly-u.5   101246712   pentatricopeptide repeat-containing protein At2g29760, chloroplastic-like 
 sot-r.1   102578352   pentatricopeptide repeat-containing protein At2g29760, chloroplastic-like 
 vvi-u.5   100249213   pentatricopeptide repeat-containing protein At1g11290, chloroplastic 
 vvi-u.5   100259519   pentatricopeptide repeat-containing protein At1g08070, chloroplastic 
 osa-u.5   4350219   pentatricopeptide repeat-containing protein At3g12770 
 zma-u.5   100384484   Tetratricopeptide-like helical 
 hvu-r.1   123447821   pentatricopeptide repeat-containing protein At3g12770-like 
 sbi-r.1   8076792   pentatricopeptide repeat-containing protein At3g12770 
 bdi-r.1   104584572   pentatricopeptide repeat-containing protein At3g12770 

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Top 50 coexpressed genes to 107823206 (nta-r.1 coexpression data)

 KEGG ID   Pathway name   #genes in coex list   #genes in genome   -log10(p)   Link to the KEGG* map 
(Multiple genes)

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Top 50 enrichment test to 107823206 (nta-r.1 coexpression data)

CoexMap"107823206"


ntaLOC107823206 | Entrez gene ID : 107823206      
Species nta sly sot vvi osa zma hvu sbi bdi tae bna ppo cre mtr ath gma bra ghi cit
Paralog 2 1 1 2 1 1 1 1 1 0 0 0 0 0 0 0 0 0 0
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CoexMap
Chloroplast
Nucleus

functional annotation
KEGG
GO BP
GO:0009451 [list] [network] RNA modification  (732 genes)  IEA  
GO CC
GO MF
GO:0003723 [list] [network] RNA binding  (2607 genes)  IEA  
GO:0005515 [list] [network] protein binding  (7685 genes)  IEA  
Protein XP_016505293.1 [sequence] [blastp]
Subcellular
localization
wolf
chlo 5,  cyto 2,  nucl 1,  mito 1,  cyto_mito 1,  cyto_pero 1,  cyto_E.R. 1,  cyto_plas 1  (predict for XP_016505293.1)
Subcellular
localization
TargetP
other 6  (predict for XP_016505293.1)
Gene expression
All samples [Expression pattern]
Tissue specificity*
Show Coexpressed Genes
Gene Function KEGG Entrez
Gene
ID		 Other ID Link Target Reference

nta-r.1
for
107823206
nta-r.1
for
107790744
sly-u.5
for
101246712
sot-r.1
for
102578352
vvi-u.5
for
100249213
vvi-u.5
for
100259519
osa-u.5
for
4350219
zma-u.5
for
100384484
hvu-r.1
for
123447821
sbi-r.1
for
8076792
bdi-r.1
for
104584572


Ortholog ID: 13866
Species nta nta sly sot vvi vvi osa zma hvu sbi bdi
Symbol LOC107823206 LOC107790744 LOC101246712 LOC102578352 LOC100249213 LOC100259519 LOC4350219 LOC100384484 LOC123447821 LOC8076792 LOC104584572
Function* pentatricopeptide repeat-containing protein At1g11290, chloroplastic-like pentatricopeptide repeat-containing protein At1g11290, chloroplastic-like pentatricopeptide repeat-containing protein At2g29760, chloroplastic-like pentatricopeptide repeat-containing protein At2g29760, chloroplastic-like pentatricopeptide repeat-containing protein At1g11290, chloroplastic pentatricopeptide repeat-containing protein At1g08070, chloroplastic pentatricopeptide repeat-containing protein At3g12770 Tetratricopeptide-like helical pentatricopeptide repeat-containing protein At3g12770-like pentatricopeptide repeat-containing protein At3g12770 pentatricopeptide repeat-containing protein At3g12770
Coexmap

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Coexpression

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KEGG Info
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
osa00240 Pyrimidine metabolism 3
osa01232 Nucleotide metabolism 3
osa00230 Purine metabolism 2
osa00480 Glutathione metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sbi03083 Polycomb repressive complex 3
sbi04120 Ubiquitin mediated proteolysis 3
sbi04141 Protein processing in endoplasmic reticulum 3
Expression Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern
Entrez Gene ID* 107823206 107790744 101246712 102578352 100249213 100259519 4350219 100384484 123447821 8076792 104584572
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