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Orthologous genes in OrthoFinder**

Species Gene Description
 gma-u.5   100499685   uncharacterized LOC100499685 
 gma-r.7   100499685   uncharacterized LOC100499685 
 gma-u.5   100779884   60S ribosomal protein L10 
 gma-u.5   100815571   60S ribosomal protein L10 
 gma-u.5   100305619   uncharacterized LOC100305619 
 mtr-u.5   11409699   60S ribosomal protein L10 
 mtr-u.5   25489847   60S ribosomal protein L10 
 mtr-u.5   25487737   60S ribosomal protein L10 
 ppo-u.5   7494652   60S ribosomal protein L10 
 ath-u.5   RPL10B   Ribosomal protein L16p/L10e family protein 
 ath-u.5   SAC52   Ribosomal protein L16p/L10e family protein 
 ath-u.5   SAG24   senescence associated gene 24 
 vvi-u.5   100241995   large ribosomal subunit protein uL16 
 vvi-u.5   100262228   large ribosomal subunit protein uL16 
 sly-u.5   101263720   large ribosomal subunit protein uL16 
 sly-u.5   101264022   large ribosomal subunit protein uL16 
 sly-u.5   ACI29   60S ribosomal protein L10 
 osa-u.5   4337928   60S ribosomal protein L10-2-like 
 osa-u.5   4350098   60S ribosomal protein L10-1-like 
 zma-u.5   100282959   60S ribosomal protein L10-3 
 zma-u.5   542298   60S ribosomal protein L10-3 

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Top 50 coexpressed genes to 100499685 (gma-u.5 coexpression data)

 KEGG ID   Pathway name   #genes in coex list   #genes in genome   -log10(p)   Link to the KEGG* map 
(Multiple genes)

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Top 50 enrichment test to 100499685 (gma-u.5 coexpression data)

CoexMap"100499685"


gmaLOC100499685 | Entrez gene ID : 100499685    
Species gma mtr ppo ath vvi sly osa zma cre ghi cit hvu bdi sot bra sbi tae nta bna
Paralog 5 3 1 3 2 3 2 2 0 0 0 0 0 0 0 0 0 0 0
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CoexMap
Chloroplast
Nucleus

functional annotation
KEGG gmx03010 [list] [network] Ribosome (1072 genes)
GO BP
GO:0000027 [list] [network] ribosomal large subunit assembly  (46 genes)  IEA  
GO:0006412 [list] [network] translation  (852 genes)  IEA  
GO CC
GO:0022625 [list] [network] cytosolic large ribosomal subunit  (230 genes)  IEA  
GO:0005840 [list] [network] ribosome  (633 genes)  IEA  
GO MF
GO:0003735 [list] [network] structural constituent of ribosome  (610 genes)  IEA  
Protein NP_001238332.1 [sequence] [blastp]
Subcellular
localization
wolf
chlo 4,  chlo_mito 4,  mito 3,  cyto 1  (predict for NP_001238332.1)
Subcellular
localization
TargetP
mito 6,  other 6  (predict for NP_001238332.1)
Gene expression
All samples [Expression pattern]
Tissue specificity*
Show Coexpressed Genes
Gene Function KEGG Entrez
Gene
ID		 Other ID Link Target Reference

gma-u.5
for
100499685

.
gma-r.7
for
100499685

.
gma-u.5
for
100779884

.
gma-u.5
for
100815571

.
gma-u.5
for
100305619

.
mtr-u.5
for
11409699

.
mtr-u.5
for
25489847

.
mtr-u.5
for
25487737

.
ppo-u.5
for
7494652

.
ath-u.5
for
RPL10B

.
ath-u.5
for
SAC52

.
ath-u.5
for
SAG24

.
vvi-u.5
for
100241995

.
vvi-u.5
for
100262228

.
sly-u.5
for
101263720

.
sly-u.5
for
101264022

.
sly-u.5
for
ACI29

.
osa-u.5
for
4337928

.
osa-u.5
for
4350098

.
zma-u.5
for
100282959

.
zma-u.5
for
542298

.


Ortholog ID: 1947
Species ath ath gma gma sly sly osa zma zma bra vvi vvi ppo mtr mtr tae tae hvu hvu ghi ghi bna bna cre sbi sbi sot sot cit cit bdi bdi nta nta
Symbol SAC52 RPL10B LOC100779884 LOC100815571 LOC101263720 LOC101264022 LOC4337928 LOC100282959 LOC542298 LOC103872125 LOC100241995 LOC100262228 LOC7494652 LOC11409699 LOC25487737 LOC123099935 LOC542899 LOC123447866 LOC123426547 LOC107936005 LOC107904859 LOC106394929 LOC106432562 CHLRE_09g388200v5 LOC8062999 LOC8073823 LOC102583043 LOC102580084 LOC102626628 LOC102625379 LOC100840282 LOC100823401 LOC107796739 LOC107766087
Function* Ribosomal protein L16p/L10e family protein Ribosomal protein L16p/L10e family protein 60S ribosomal protein L10 60S ribosomal protein L10 large ribosomal subunit protein uL16 large ribosomal subunit protein uL16 60S ribosomal protein L10-2-like 60S ribosomal protein L10-3 60S ribosomal protein L10-3 60S ribosomal protein L10-1 large ribosomal subunit protein uL16 large ribosomal subunit protein uL16 60S ribosomal protein L10 60S ribosomal protein L10 60S ribosomal protein L10 60S ribosomal protein L10 60S ribosomal protein L10-2 60S ribosomal protein L10-1-like 60S ribosomal protein L10-2 60S ribosomal protein L10 60S ribosomal protein L10 60S ribosomal protein L10-3-like 60S ribosomal protein L10-3-like ribosomal protein L10 60S ribosomal protein L10 60S ribosomal protein L10-1 60S ribosomal protein L10-like 60S ribosomal protein L10-like 60S ribosomal protein L10 60S ribosomal protein L10 60S ribosomal protein L10 60S ribosomal protein L10-1 large ribosomal subunit protein uL16 large ribosomal subunit protein uL16-like
Coexmap

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Coexpression

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KEGG Info
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ath03010 Ribosome 20
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ath03010 Ribosome 16
ath01230 Biosynthesis of amino acids 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma00906 Carotenoid biosynthesis 3
gma00592 alpha-Linolenic acid metabolism 2
gma00010 Glycolysis / Gluconeogenesis 2
gma00040 Pentose and glucuronate interconversions 2
gma00053 Ascorbate and aldarate metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma03010 Ribosome 13
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sly03010 Ribosome 16
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sly03010 Ribosome 16
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
osa03010 Ribosome 20
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
zma03010 Ribosome 17
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
zma03010 Ribosome 20
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bra03010 Ribosome 20
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
vvi03010 Ribosome 15
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
vvi03010 Ribosome 18
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ppo03010 Ribosome 12
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
mtr00480 Glutathione metabolism 10
mtr00902 Monoterpenoid biosynthesis 3
mtr01240 Biosynthesis of cofactors 2
mtr00592 alpha-Linolenic acid metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
mtr03010 Ribosome 12
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae03040 Spliceosome 3
tae04141 Protein processing in endoplasmic reticulum 3
tae04144 Endocytosis 3
tae03015 mRNA surveillance pathway 3
tae03010 Ribosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae03008 Ribosome biogenesis in eukaryotes 5
tae04120 Ubiquitin mediated proteolysis 3
tae03010 Ribosome 3
tae03013 Nucleocytoplasmic transport 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
hvu03010 Ribosome 17
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi03013 Nucleocytoplasmic transport 10
ghi03010 Ribosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi04144 Endocytosis 8
ghi03010 Ribosome 5
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna03010 Ribosome 6
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna03010 Ribosome 6
bna00261 Monobactam biosynthesis 3
bna00300 Lysine biosynthesis 3
bna01230 Biosynthesis of amino acids 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cre03010 Ribosome 18
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sbi03010 Ribosome 17
sbi00190 Oxidative phosphorylation 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sbi03010 Ribosome 15
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sot03010 Ribosome 13
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sot03010 Ribosome 10
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cit03010 Ribosome 11
cit03040 Spliceosome 2
cit03013 Nucleocytoplasmic transport 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cit03010 Ribosome 17
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bdi04712 Circadian rhythm - plant 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bdi03010 Ribosome 19
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta03010 Ribosome 8
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta03010 Ribosome 8
Expression Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern
Entrez Gene ID* 837993 837036 100779884 100815571 101263720 101264022 4337928 100282959 542298 103872125 100241995 100262228 7494652 11409699 25487737 123099935 542899 123447866 123426547 107936005 107904859 106394929 106432562 5720023 8062999 8073823 102583043 102580084 102626628 102625379 100840282 100823401 107796739 107766087
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