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Orthologous genes in OrthoFinder**

Species Gene Description
 gma-u.5   100527488   E3 ubiquitin-protein ligase RNF5 
 gma-r.7   100527488   E3 ubiquitin-protein ligase RNF5 
 gma-u.5   100811423   E3 ubiquitin-protein ligase RNF185 
 gma-u.5   100814783   E3 ubiquitin-protein ligase RNF185 
 gma-u.5   100794086   E3 ubiquitin-protein ligase RNF5 
 mtr-u.5   25482097   E3 ubiquitin-protein ligase RNF5 
 mtr-u.5   11405855   E3 ubiquitin-protein ligase RNF185 
 ppo-u.5   18099325   uncharacterized LOC18099325 
 ppo-u.5   7478003   uncharacterized LOC7478003 
 ppo-u.5   18104996   uncharacterized LOC18104996 
 ath-u.5   AT2G23780   RING/U-box superfamily protein 
 ath-u.5   AT1G19310   RING/U-box superfamily protein 
 vvi-u.5   100246078   uncharacterized LOC100246078 
 vvi-u.5   100259073   uncharacterized LOC100259073 
 vvi-u.5   100245178   E3 ubiquitin-protein ligase RNF5-like 
 sly-u.5   101262966   uncharacterized LOC101262966 
 sly-u.5   101263175   uncharacterized LOC101263175 
 sly-u.5   101256837   uncharacterized LOC101256837 
 osa-u.5   4352888   uncharacterized LOC4352888 
 osa-u.5   4333714   uncharacterized LOC4333714 
 osa-u.5   4325492   uncharacterized LOC4325492 
 zma-u.5   100193211   uncharacterized LOC100193211 
 zma-u.5   100285907   uncharacterized LOC100285907 
 zma-u.5   100283782   RING finger protein 5 

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Top 50 coexpressed genes to 100527488 (gma-u.5 coexpression data)

 KEGG ID   Pathway name   #genes in coex list   #genes in genome   -log10(p)   Link to the KEGG* map 
(Multiple genes)

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Top 50 enrichment test to 100527488 (gma-u.5 coexpression data)

CoexMap"100527488"


gmaLOC100527488 | Entrez gene ID : 100527488      
Species gma mtr ppo ath vvi sly osa zma cre ghi cit hvu bdi sot bra sbi tae nta bna
Paralog 5 2 3 2 3 3 3 3 0 0 0 0 0 0 0 0 0 0 0
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CoexMap
Chloroplast
Nucleus

functional annotation
KEGG gmx04141 [list] [network] Protein processing in endoplasmic reticulum (375 genes)
GO BP
GO:0006511 [list] [network] ubiquitin-dependent protein catabolic process  (481 genes)  IEA  
GO CC
GO:0005783 [list] [network] endoplasmic reticulum  (889 genes)  IEA  
GO MF
GO:0044390 [list] [network] ubiquitin-like protein conjugating enzyme binding  (53 genes)  IEA  
GO:0061630 [list] [network] ubiquitin protein ligase activity  (292 genes)  IEA  
GO:0046872 [list] [network] metal ion binding  (3089 genes)  IEA  
Protein XP_003528194.1 [sequence] [blastp]
Subcellular
localization
wolf
nucl 5,  mito 2,  cyto 1,  plas 1,  cyto_plas 1  (predict for XP_003528194.1)
Subcellular
localization
TargetP
other 8  (predict for XP_003528194.1)
Gene expression
All samples [Expression pattern]
Tissue specificity*
Show Coexpressed Genes
Gene Function KEGG Entrez
Gene
ID		 Other ID Link Target Reference

gma-u.5
for
100527488

.
gma-r.7
for
100527488

.
gma-u.5
for
100811423

.
gma-u.5
for
100814783

.
gma-u.5
for
100794086

.
mtr-u.5
for
25482097

.
mtr-u.5
for
11405855

.
ppo-u.5
for
18099325

.
ppo-u.5
for
7478003

.
ppo-u.5
for
18104996

.
ath-u.5
for
AT2G23780

.
ath-u.5
for
AT1G19310

.
vvi-u.5
for
100246078

.
vvi-u.5
for
100259073

.
vvi-u.5
for
100245178

.
sly-u.5
for
101262966

.
sly-u.5
for
101263175

.
sly-u.5
for
101256837

.
osa-u.5
for
4352888

.
osa-u.5
for
4333714

.
osa-u.5
for
4325492

.
zma-u.5
for
100193211

.
zma-u.5
for
100285907

.
zma-u.5
for
100283782

.


Ortholog ID: 1568
Species ath gma gma sly sly osa osa zma zma bra vvi vvi ppo ppo mtr mtr tae hvu ghi ghi bna cre sbi sbi sot sot cit cit bdi nta nta
Symbol AT2G23780 LOC100527488 LOC100811423 LOC101263175 LOC101262966 LOC4325492 LOC4352888 LOC100283782 LOC100217249 LOC103872727 LOC100259073 LOC100246078 LOC18099325 LOC7483773 LOC11405855 LOC25482097 LOC123101976 LOC123447066 LOC107926562 LOC121209684 LOC106397006 CHLRE_17g739100v5 LOC8071535 LOC8054177 LOC102594316 LOC102600779 LOC102626834 LOC102619686 LOC100839731 LOC107801886 LOC107815714
Function* RING/U-box superfamily protein E3 ubiquitin-protein ligase RNF5 E3 ubiquitin-protein ligase RNF185 uncharacterized LOC101263175 uncharacterized LOC101262966 uncharacterized LOC4325492 uncharacterized LOC4352888 RING finger protein 5 putative RING zinc finger domain superfamily protein E3 ubiquitin-protein ligase RNF185 uncharacterized LOC100259073 uncharacterized LOC100246078 uncharacterized LOC18099325 uncharacterized LOC7483773 E3 ubiquitin-protein ligase RNF185 E3 ubiquitin-protein ligase RNF5 E3 ubiquitin-protein ligase RNF5-like E3 ubiquitin-protein ligase RNF5-like E3 ubiquitin-protein ligase RNF5 E3 ubiquitin-protein ligase RNF185 E3 ubiquitin-protein ligase RNF185 uncharacterized protein E3 ubiquitin-protein ligase RNF5 E3 ubiquitin-protein ligase RNF5 RING finger protein 5-like E3 ubiquitin-protein ligase RNF185-like uncharacterized LOC102626834 uncharacterized LOC102619686 E3 ubiquitin-protein ligase RNF185 uncharacterized LOC107801886 uncharacterized LOC107815714
Coexmap

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Coexpression

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KEGG Info
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma04141 Protein processing in endoplasmic reticulum 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma04141 Protein processing in endoplasmic reticulum 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
osa04626 Plant-pathogen interaction 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
osa04141 Protein processing in endoplasmic reticulum 4
osa03040 Spliceosome 2
osa04120 Ubiquitin mediated proteolysis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
zma04120 Ubiquitin mediated proteolysis 3
zma04141 Protein processing in endoplasmic reticulum 2
zma03013 Nucleocytoplasmic transport 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bra04120 Ubiquitin mediated proteolysis 3
bra04144 Endocytosis 3
bra04141 Protein processing in endoplasmic reticulum 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
vvi04120 Ubiquitin mediated proteolysis 4
vvi04141 Protein processing in endoplasmic reticulum 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ppo03040 Spliceosome 5
ppo04141 Protein processing in endoplasmic reticulum 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ppo04141 Protein processing in endoplasmic reticulum 4
ppo04130 SNARE interactions in vesicular transport 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
mtr04130 SNARE interactions in vesicular transport 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
mtr04141 Protein processing in endoplasmic reticulum 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae00071 Fatty acid degradation 3
tae04146 Peroxisome 3
tae04141 Protein processing in endoplasmic reticulum 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
hvu04141 Protein processing in endoplasmic reticulum 3
hvu04626 Plant-pathogen interaction 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi04141 Protein processing in endoplasmic reticulum 4
ghi03040 Spliceosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi04146 Peroxisome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna04141 Protein processing in endoplasmic reticulum 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sbi04141 Protein processing in endoplasmic reticulum 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sbi00051 Fructose and mannose metabolism 2
sbi00520 Amino sugar and nucleotide sugar metabolism 2
sbi01240 Biosynthesis of cofactors 2
sbi01250 Biosynthesis of nucleotide sugars 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sot04141 Protein processing in endoplasmic reticulum 3
sot03040 Spliceosome 2
sot04144 Endocytosis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cit04141 Protein processing in endoplasmic reticulum 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bdi04141 Protein processing in endoplasmic reticulum 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta04081 Hormone signaling 4
nta04082 Neuroactive ligand signaling 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta04141 Protein processing in endoplasmic reticulum 9
nta03040 Spliceosome 3
nta04144 Endocytosis 3
Expression Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern
Entrez Gene ID* 816910 100527488 100811423 101263175 101262966 4325492 4352888 100283782 100217249 103872727 100259073 100246078 18099325 7483773 11405855 25482097 123101976 123447066 107926562 121209684 106397006 5717114 8071535 8054177 102594316 102600779 102626834 102619686 100839731 107801886 107815714
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