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Orthologous genes in OrthoFinder**

Species Gene Description
 gma-u.5   100777253   ribosomal RNA small subunit methyltransferase E 
 gma-r.7   100777253   ribosomal RNA small subunit methyltransferase E 
 mtr-u.5   25485320   ribosomal RNA small subunit methyltransferase E 
 ppo-u.5   7470758   uncharacterized LOC7470758 
 ath-u.5   AT1G50000   methyltransferase 
 bra-r.6   103871373   ribosomal RNA small subunit methyltransferase E 
 vvi-u.5   100258322   uncharacterized LOC100258322 
 ghi-r.1   121224623   ribosomal RNA small subunit methyltransferase E 
 ghi-r.1   107947400   ribosomal RNA small subunit methyltransferase E 
 cit-r.1   102624062   uncharacterized LOC102624062 
 sly-u.5   101260770   uncharacterized LOC101260770 
 sot-r.1   102579517   ribosomal RNA small subunit methyltransferase E 
 nta-r.1   107814615   uncharacterized LOC107814615 
 nta-r.1   107815886   uncharacterized LOC107815886 
 osa-u.5   4333992   uncharacterized LOC4333992 
 zma-u.5   100279709   uncharacterized LOC100279709 
 zma-u.5   103653089   uncharacterized LOC103653089 
 sbi-r.1   8060533   ribosomal RNA small subunit methyltransferase E 
 bdi-r.1   100841987   ribosomal RNA small subunit methyltransferase E 
 cre-r.1   CHLRE_03g175800v5   uncharacterized protein 

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Top 50 coexpressed genes to 100777253 (gma-u.5 coexpression data)

 KEGG ID   Pathway name   #genes in coex list   #genes in genome   -log10(p)   Link to the KEGG* map 
(Multiple genes)

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Top 50 enrichment test to 100777253 (gma-u.5 coexpression data)

CoexMap"100777253"


gmaLOC100777253 | Entrez gene ID : 100777253      
Species gma mtr ppo ath bra vvi ghi cit sly sot nta osa zma sbi bdi cre hvu tae bna
Paralog 2 1 1 1 1 1 2 1 1 1 2 1 2 1 1 1 0 0 0
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CoexMap
Chloroplast
Nucleus

functional annotation
KEGG
GO BP
GO:0070475 [list] [network] rRNA base methylation  (29 genes)  IEA  
GO CC
GO MF
GO:0070042 [list] [network] rRNA (uridine-N3-)-methyltransferase activity  (4 genes)  IEA  
Protein XP_006606004.3 [sequence] [blastp]
XP_014627760.1 [sequence] [blastp]
XP_040869223.1 [sequence] [blastp]
Subcellular
localization
wolf
mito 6,  chlo_mito 5,  chlo 4,  cyto_mito 3  (predict for XP_006606004.3)
chlo 7,  chlo_mito 4,  nucl 1  (predict for XP_014627760.1)
mito 6,  chlo_mito 5,  chlo 4,  cyto_mito 3  (predict for XP_040869223.1)
Subcellular
localization
TargetP
mito 8  (predict for XP_006606004.3)
scret 5  (predict for XP_014627760.1)
mito 8  (predict for XP_040869223.1)
Gene expression
All samples [Expression pattern]
Tissue specificity*
Show Coexpressed Genes
Gene Function KEGG Entrez
Gene
ID		 Other ID Link Target Reference

gma-u.5
for
100777253
gma-r.7
for
100777253
mtr-u.5
for
25485320
ppo-u.5
for
7470758
ath-u.5
for
AT1G50000
bra-r.6
for
103871373
vvi-u.5
for
100258322
ghi-r.1
for
121224623
ghi-r.1
for
107947400
cit-r.1
for
102624062
sly-u.5
for
101260770
sot-r.1
for
102579517
nta-r.1
for
107814615
nta-r.1
for
107815886
osa-u.5
for
4333992
zma-u.5
for
100279709
zma-u.5
for
103653089
sbi-r.1
for
8060533
bdi-r.1
for
100841987
cre-r.1
for
CHLRE_03g175800v5


Ortholog ID: 9836
Species gma mtr ppo ath bra vvi ghi ghi cit sly sot nta nta osa zma zma sbi bdi cre
Symbol LOC100777253 LOC25485320 LOC7470758 AT1G50000 LOC103871373 LOC100258322 LOC121224623 LOC107947400 LOC102624062 LOC101260770 LOC102579517 LOC107814615 LOC107815886 LOC4333992 LOC100279709 LOC103653089 LOC8060533 LOC100841987 CHLRE_03g175800v5
Function* ribosomal RNA small subunit methyltransferase E ribosomal RNA small subunit methyltransferase E uncharacterized LOC7470758 methyltransferase ribosomal RNA small subunit methyltransferase E uncharacterized LOC100258322 ribosomal RNA small subunit methyltransferase E ribosomal RNA small subunit methyltransferase E uncharacterized LOC102624062 uncharacterized LOC101260770 ribosomal RNA small subunit methyltransferase E uncharacterized LOC107814615 uncharacterized LOC107815886 uncharacterized LOC4333992 uncharacterized LOC100279709 uncharacterized LOC103653089 ribosomal RNA small subunit methyltransferase E ribosomal RNA small subunit methyltransferase E uncharacterized protein
Coexmap

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Coexpression

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KEGG Info
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma03015 mRNA surveillance pathway 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
mtr03010 Ribosome 5
mtr03008 Ribosome biogenesis in eukaryotes 2
mtr03040 Spliceosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ppo03008 Ribosome biogenesis in eukaryotes 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ath03013 Nucleocytoplasmic transport 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi03410 Base excision repair 4
ghi03060 Protein export 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi03410 Base excision repair 4
ghi03060 Protein export 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sly03013 Nucleocytoplasmic transport 2
sly03015 mRNA surveillance pathway 2
sly03040 Spliceosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sot04141 Protein processing in endoplasmic reticulum 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta03410 Base excision repair 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta03410 Base excision repair 2
nta03010 Ribosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
osa00970 Aminoacyl-tRNA biosynthesis 3
Expression Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern
Entrez Gene ID* 100777253 25485320 7470758 841424 103871373 100258322 121224623 107947400 102624062 101260770 102579517 107814615 107815886 4333992 100279709 103653089 8060533 100841987 5728859
The preparation time of this page was 3.2 [sec].