Select Species**


OK


Orthologous genes in OrthoFinder**

Species Gene Description
 gma-u.5   100777447   cysteine--tRNA ligase 2, cytoplasmic 
 gma-r.7   100777447   cysteine--tRNA ligase 2, cytoplasmic 
 gma-m.5   100777447   cysteine--tRNA ligase 2, cytoplasmic 
 gma-u.5   100786700   cysteine--tRNA ligase, chloroplastic/mitochondrial 
 gma-u.5   100777971   cysteine--tRNA ligase, chloroplastic/mitochondrial 
 gma-u.5   100812332   cysteine--tRNA ligase 2, cytoplasmic 
 mtr-u.5   11432999   cysteine--tRNA ligase, chloroplastic/mitochondrial 
 mtr-u.5   11431016   cysteine--tRNA ligase 2, cytoplasmic 
 ppo-u.5   7475579   cysteine--tRNA ligase 2, cytoplasmic 
 ppo-u.5   7458385   cysteine--tRNA ligase, chloroplastic/mitochondrial 
 ath-u.5   SYCO ARATH   Cysteinyl-tRNA synthetase, class Ia family protein 
 ath-u.5   AT3G56300   Cysteinyl-tRNA synthetase, class Ia family protein 
 ath-u.5   AT5G38830   Cysteinyl-tRNA synthetase, class Ia family protein 
 vvi-u.5   100854736   cysteine--tRNA ligase 2, cytoplasmic 
 vvi-u.5   100251639   cysteine--tRNA ligase 2, cytoplasmic 
 vvi-u.5   100245851   cysteine--tRNA ligase, chloroplastic/mitochondrial 
 sly-u.5   101251377   cysteine--tRNA ligase 2, cytoplasmic 
 sly-u.5   101256769   cysteine--tRNA ligase, chloroplastic/mitochondrial 
 osa-u.5   9270000   cysteine--tRNA ligase CPS1, chloroplastic/mitochondrial 
 osa-u.5   4347821   cysteine--tRNA ligase CPS1 homolog, chloroplastic/mitochondrial-like 
 zma-u.5   100280495   uncharacterized LOC100280495 
 zma-u.5   100193566   Cysteine--tRNA ligase 1 cytoplasmic 
 zma-u.5   100192902   Cysteine--tRNA ligase chloroplastic/mitochondrial 

close


Top 50 coexpressed genes to 100777447 (gma-u.5 coexpression data)

 KEGG ID   Pathway name   #genes in coex list   #genes in genome   -log10(p)   Link to the KEGG* map 
(Multiple genes)

close

close

Top 50 enrichment test to 100777447 (gma-u.5 coexpression data)

CoexMap"100777447"


gmaLOC100777447 | Entrez gene ID : 100777447      
Species gma mtr ppo ath vvi sly osa zma bdi hvu bra cit bna sbi ghi sot nta cre tae
Paralog 6 2 2 3 3 2 2 3 0 0 0 0 0 0 0 0 0 0 0
Show/Hide Columns:        



CoexMap
Chloroplast
Nucleus

functional annotation
KEGG gmx00970 [list] [network] Aminoacyl-tRNA biosynthesis (137 genes)
GO BP
GO:0006423 [list] [network] cysteinyl-tRNA aminoacylation  (4 genes)  IEA  
GO CC
GO:0005737 [list] [network] cytoplasm  (9233 genes)  IEA  
GO MF
GO:0004817 [list] [network] cysteine-tRNA ligase activity  (4 genes)  IEA  
GO:0005524 [list] [network] ATP binding  (3753 genes)  IEA  
Protein XP_006605905.1 [sequence] [blastp]
XP_006605906.1 [sequence] [blastp]
XP_006605907.1 [sequence] [blastp]
Subcellular
localization
wolf
nucl 4,  cyto 4,  plas 1,  vacu 1,  pero 1  (predict for XP_006605905.1)
nucl 4,  cyto 4,  plas 1,  vacu 1,  pero 1  (predict for XP_006605906.1)
chlo 2,  nucl 2,  extr 1,  vacu 1,  cyto_nucl 1,  plas 1,  cysk_nucl 1,  E.R._vacu 1,  mito_plas 1  (predict for XP_006605907.1)
Subcellular
localization
TargetP
other 8  (predict for XP_006605905.1)
other 8  (predict for XP_006605906.1)
scret 7,  other 3  (predict for XP_006605907.1)
Gene expression
All samples [Expression pattern]
Tissue specificity*
Show Coexpressed Genes
Gene Function KEGG Entrez
Gene
ID		 Other ID Link Target Reference

gma-u.5
for
100777447
gma-r.7
for
100777447
gma-m.5
for
100777447
gma-u.5
for
100786700
gma-u.5
for
100777971
gma-u.5
for
100812332
mtr-u.5
for
11432999
mtr-u.5
for
11431016
ppo-u.5
for
7475579
ppo-u.5
for
7458385
ath-u.5
for
SYCO ARATH
ath-u.5
for
AT3G56300
ath-u.5
for
AT5G38830
vvi-u.5
for
100854736
vvi-u.5
for
100251639
vvi-u.5
for
100245851
sly-u.5
for
101251377
sly-u.5
for
101256769
osa-u.5
for
9270000
osa-u.5
for
4347821
zma-u.5
for
100280495
zma-u.5
for
100193566
zma-u.5
for
100192902


Ortholog ID: 1960
Species gma gma mtr mtr ppo ppo ath ath bra bra vvi vvi ghi ghi bna bna cit cit sly sly sot sot nta nta osa zma zma tae tae hvu hvu sbi sbi bdi bdi cre
Symbol LOC100786700 LOC100812332 LOC11432999 LOC11431016 LOC7458385 LOC7475579 SYCO ARATH AT5G38830 LOC103856987 LOC103850130 LOC100245851 LOC100854736 LOC107947014 LOC107947024 LOC106352661 LOC111211565 LOC102608826 LOC102624731 LOC101251377 LOC101256769 LOC102604325 LOC102581041 LOC107796507 LOC107766982 LOC4347821 LOC100193566 LOC103644288 LOC123104780 LOC123113064 LOC123451939 LOC123449680 LOC110430328 LOC8077246 LOC100834139 LOC100837019 CHLRE_01g069472v5
Function* cysteine--tRNA ligase, chloroplastic/mitochondrial cysteine--tRNA ligase 2, cytoplasmic cysteine--tRNA ligase, chloroplastic/mitochondrial cysteine--tRNA ligase 2, cytoplasmic cysteine--tRNA ligase, chloroplastic/mitochondrial cysteine--tRNA ligase 2, cytoplasmic Cysteinyl-tRNA synthetase, class Ia family protein Cysteinyl-tRNA synthetase, class Ia family protein cysteine--tRNA ligase 2, cytoplasmic-like cysteine--tRNA ligase 2, cytoplasmic cysteine--tRNA ligase, chloroplastic/mitochondrial cysteine--tRNA ligase 2, cytoplasmic cysteine--tRNA ligase 2, cytoplasmic cysteine--tRNA ligase 2, cytoplasmic cysteine--tRNA ligase 2, cytoplasmic cysteine--tRNA ligase 2, cytoplasmic-like cysteine--tRNA ligase, chloroplastic/mitochondrial cysteine--tRNA ligase 2, cytoplasmic cysteine--tRNA ligase 2, cytoplasmic cysteine--tRNA ligase, chloroplastic/mitochondrial cysteine--tRNA ligase, chloroplastic/mitochondrial cysteine--tRNA ligase 2, cytoplasmic cysteine--tRNA ligase, chloroplastic/mitochondrial cysteine--tRNA ligase, chloroplastic/mitochondrial-like cysteine--tRNA ligase CPS1 homolog, chloroplastic/mitochondrial-like Cysteine--tRNA ligase 1 cytoplasmic cysteine--tRNA ligase CPS1, chloroplastic/mitochondrial-like cysteine--tRNA ligase CPS1 homolog, chloroplastic/mitochondrial cysteine--tRNA ligase CPS1 homolog, chloroplastic/mitochondrial cysteine--tRNA ligase CPS1 homolog, chloroplastic/mitochondrial cysteine--tRNA ligase CPS1, chloroplastic/mitochondrial-like cysteine--tRNA ligase, chloroplastic/mitochondrial-like cysteine--tRNA ligase, chloroplastic/mitochondrial cysteine--tRNA ligase CPS1, chloroplastic/mitochondrial cysteine--tRNA ligase CPS1 homolog, chloroplastic/mitochondrial uncharacterized protein
Coexmap

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.
Coexpression

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.
KEGG Info
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma00970 Aminoacyl-tRNA biosynthesis 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma00970 Aminoacyl-tRNA biosynthesis 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
mtr00970 Aminoacyl-tRNA biosynthesis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
mtr00970 Aminoacyl-tRNA biosynthesis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ppo00970 Aminoacyl-tRNA biosynthesis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ppo03040 Spliceosome 5
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ath00970 Aminoacyl-tRNA biosynthesis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ath03040 Spliceosome 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bra01200 Carbon metabolism 2
bra00520 Amino sugar and nucleotide sugar metabolism 2
bra01250 Biosynthesis of nucleotide sugars 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bra00190 Oxidative phosphorylation 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
vvi00970 Aminoacyl-tRNA biosynthesis 5
vvi03010 Ribosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
vvi00970 Aminoacyl-tRNA biosynthesis 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi00970 Aminoacyl-tRNA biosynthesis 5
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi00970 Aminoacyl-tRNA biosynthesis 5
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna00970 Aminoacyl-tRNA biosynthesis 7
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna00970 Aminoacyl-tRNA biosynthesis 7
bna03010 Ribosome 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cit00970 Aminoacyl-tRNA biosynthesis 5
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cit00970 Aminoacyl-tRNA biosynthesis 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sly03008 Ribosome biogenesis in eukaryotes 4
sly03010 Ribosome 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sly00970 Aminoacyl-tRNA biosynthesis 3
sly01240 Biosynthesis of cofactors 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sot01240 Biosynthesis of cofactors 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sot04141 Protein processing in endoplasmic reticulum 3
sot00970 Aminoacyl-tRNA biosynthesis 2
sot04145 Phagosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta00780 Biotin metabolism 3
nta01240 Biosynthesis of cofactors 3
nta03018 RNA degradation 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta00970 Aminoacyl-tRNA biosynthesis 5
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
osa00970 Aminoacyl-tRNA biosynthesis 8
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
zma00970 Aminoacyl-tRNA biosynthesis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
zma00970 Aminoacyl-tRNA biosynthesis 5
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae00970 Aminoacyl-tRNA biosynthesis 9
tae03040 Spliceosome 3
tae04141 Protein processing in endoplasmic reticulum 3
tae04144 Endocytosis 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae00970 Aminoacyl-tRNA biosynthesis 7
tae03040 Spliceosome 2
tae04141 Protein processing in endoplasmic reticulum 2
tae04144 Endocytosis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
hvu01240 Biosynthesis of cofactors 3
hvu00970 Aminoacyl-tRNA biosynthesis 3
hvu00860 Porphyrin metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
hvu03015 mRNA surveillance pathway 2
hvu00970 Aminoacyl-tRNA biosynthesis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sbi00970 Aminoacyl-tRNA biosynthesis 7
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sbi00970 Aminoacyl-tRNA biosynthesis 5
sbi01200 Carbon metabolism 2
sbi01240 Biosynthesis of cofactors 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bdi01200 Carbon metabolism 4
bdi00970 Aminoacyl-tRNA biosynthesis 3
bdi00020 Citrate cycle (TCA cycle) 3
bdi01210 2-Oxocarboxylic acid metabolism 2
bdi03420 Nucleotide excision repair 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bdi03010 Ribosome 4
bdi00970 Aminoacyl-tRNA biosynthesis 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cre00860 Porphyrin metabolism 5
cre01240 Biosynthesis of cofactors 4
cre03060 Protein export 2
cre00970 Aminoacyl-tRNA biosynthesis 2
Expression Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern
Entrez Gene ID* 100786700 100812332 11432999 11431016 7458385 7475579 817673 833874 103856987 103850130 100245851 100854736 107947014 107947024 106352661 111211565 102608826 102624731 101251377 101256769 102604325 102581041 107796507 107766982 4347821 100193566 103644288 123104780 123113064 123451939 123449680 110430328 8077246 100834139 100837019 5725796
The preparation time of this page was 0.1 [sec].