ATTED-II : GeneCoexpression result

Select Species^**

Orthologous genes in OrthoFinder^**

Species	Gene	Description
gma-u.5	100783451	CTD small phosphatase-like protein 2-like
gma-r.7	100783451	CTD small phosphatase-like protein 2-like
gma-u.5	100819720	CTD nuclear envelope phosphatase 1 homolog
mtr-u.5	11411270	carboxy-terminal domain RNA polymerase II polypeptide A small phosphatase 1
mtr-u.5	11428642	carboxy-terminal domain RNA polymerase II polypeptide A small phosphatase 1
ppo-u.5	7488022	uncharacterized LOC7488022
ppo-u.5	7487322	uncharacterized LOC7487322
ath-u.5	AT3G55960	Haloacid dehalogenase-like hydrolase (HAD) superfamily protein
bra-r.6	103830029	CTD small phosphatase-like protein
bra-r.6	103841497	CTD small phosphatase-like protein
bra-r.6	103865772	carboxy-terminal domain RNA polymerase II polypeptide A small phosphatase 1
vvi-u.5	100248837	uncharacterized LOC100248837
vvi-u.5	100262172	uncharacterized LOC100262172
ghi-r.1	121208152	probable phosphatase PSR2
ghi-r.1	121222645	carboxy-terminal domain RNA polymerase II polypeptide A small phosphatase 1
ghi-r.1	107931845	carboxy-terminal domain RNA polymerase II polypeptide A small phosphatase 2
bna-r.1	106450261	CTD small phosphatase-like protein
bna-r.1	106394611	CTD small phosphatase-like protein
bna-r.1	106382038	CTD small phosphatase-like protein
cit-r.1	102609403	uncharacterized LOC102609403
cit-r.1	102628931	uncharacterized LOC102628931
sly-u.5	101252994	uncharacterized LOC101252994
sly-u.5	101257861	uncharacterized LOC101257861
sot-r.1	102600526	CTD nuclear envelope phosphatase 1 homolog
sot-r.1	102583105	carboxy-terminal domain RNA polymerase II polypeptide A small phosphatase 1-like
nta-r.1	107828293	uncharacterized LOC107828293
nta-r.1	107824362	uncharacterized LOC107824362
nta-r.1	107812956	uncharacterized LOC107812956
osa-u.5	4327404	uncharacterized LOC4327404
osa-u.5	4339051	uncharacterized LOC4339051
zma-u.5	103635784	probable phosphatase PSR2
zma-u.5	100216776	uncharacterized LOC100216776
zma-u.5	100282077	uncharacterized LOC100282077
tae-r.2	123059667	CTD nuclear envelope phosphatase 1 homolog
tae-r.2	123079643	CTD small phosphatase-like protein
tae-r.2	123071301	carboxy-terminal domain RNA polymerase II polypeptide A small phosphatase 1
hvu-r.1	123445067	CTD nuclear envelope phosphatase 1 homolog
hvu-r.1	123444980	CTD small phosphatase-like protein
sbi-r.1	8057753	CTD nuclear envelope phosphatase 1 homolog
sbi-r.1	8061792	CTD nuclear envelope phosphatase 1 homolog
bdi-r.1	100829084	uncharacterized LOC100829084
bdi-r.1	100828475	CTD small phosphatase-like protein
cre-r.1	CHLRE_02g114500v5	uncharacterized protein

Top 50 coexpressed genes to 100783451 (gma-u.5 coexpression data)

KEGG ID	Pathway name	#genes in coex list	#genes in genome	-log10(p)	Link to the KEGG^* map (Multiple genes)

Top 50 enrichment test to 100783451 (gma-u.5 coexpression data)

CoexMap"100783451"

[Cytoscape]

Annotation

functional annotation

KEGG

GO BP

GO CC

GO MF

GO:0004721 [list] [network] phosphoprotein phosphatase activity

(268 genes)

IEA

Protein

NP_001242244.1 [sequence] [blastp]

Subcellular
localization
wolf

nucl 2, chlo 1, cyto 1, extr 1, E.R. 1, nucl_plas 1, cyto_E.R. 1

(predict for NP_001242244.1)

Subcellular
localization
TargetP

mito 5

(predict for NP_001242244.1)

Gene expression

All samples

[Expression pattern]

Tissue specificity^*

Coexpression

	Gene	Function	KEGG					Entrez Gene ID	Other ID	Link	Target		Reference
	Gene	Function	KEGG					Entrez Gene ID	Other ID	Link	gma-u.5 for 100783451	gma-r.7 for 100783451	gma-u.5 for 100819720	mtr-u.5 for 11411270	mtr-u.5 for 11428642	ppo-u.5 for 7488022	ppo-u.5 for 7487322	ath-u.5 for AT3G55960	bra-r.6 for 103830029	bra-r.6 for 103841497	bra-r.6 for 103865772	vvi-u.5 for 100248837	vvi-u.5 for 100262172	ghi-r.1 for 121208152	ghi-r.1 for 121222645	ghi-r.1 for 107931845	bna-r.1 for 106450261	bna-r.1 for 106394611	bna-r.1 for 106382038	cit-r.1 for 102609403	cit-r.1 for 102628931	sly-u.5 for 101252994	sly-u.5 for 101257861	sot-r.1 for 102600526	sot-r.1 for 102583105	nta-r.1 for 107828293	nta-r.1 for 107824362	nta-r.1 for 107812956	osa-u.5 for 4327404	osa-u.5 for 4339051	zma-u.5 for 103635784	zma-u.5 for 100216776	zma-u.5 for 100282077	tae-r.2 for 123059667	tae-r.2 for 123079643	tae-r.2 for 123071301	hvu-r.1 for 123445067	hvu-r.1 for 123444980	sbi-r.1 for 8057753	sbi-r.1 for 8061792	bdi-r.1 for 100829084	bdi-r.1 for 100828475	cre-r.1 for CHLRE_02g114500v5

Ortholog

Ortholog ID: 3115

Species

gma

mtr

ppo

ath

bra

vvi

ghi

bna

cit

sly

sot

nta

osa

zma

tae

hvu

sbi

bdi

cre

Symbol

Function^*

CTD small phosphatase-like protein 2-like

CTD nuclear envelope phosphatase 1 homolog

carboxy-terminal domain RNA polymerase II polypeptide A small phosphatase 1

uncharacterized LOC7488022

uncharacterized LOC7490326

Haloacid dehalogenase-like hydrolase (HAD) superfamily protein

CTD small phosphatase-like protein

carboxy-terminal domain RNA polymerase II polypeptide A small phosphatase 1

uncharacterized LOC100248837

uncharacterized LOC100262172

probable phosphatase PSR2

carboxy-terminal domain RNA polymerase II polypeptide A small phosphatase 1

CTD nuclear envelope phosphatase 1

CTD small phosphatase-like protein

uncharacterized LOC102609403

uncharacterized LOC102628931

uncharacterized LOC101252994

uncharacterized LOC101257861

CTD nuclear envelope phosphatase 1 homolog

carboxy-terminal domain RNA polymerase II polypeptide A small phosphatase 1-like

uncharacterized LOC107828293

uncharacterized LOC107812956

uncharacterized LOC107829643

uncharacterized LOC4327404

uncharacterized LOC4339051

probable phosphatase PSR2

uncharacterized LOC100216776

uncharacterized LOC100282077

CTD nuclear envelope phosphatase 1 homolog

CTD small phosphatase-like protein

carboxy-terminal domain RNA polymerase II polypeptide A small phosphatase 1

CTD nuclear envelope phosphatase 1 homolog

CTD small phosphatase-like protein

CTD nuclear envelope phosphatase 1 homolog

uncharacterized LOC100829084

CTD small phosphatase-like protein

uncharacterized protein

Coexmap

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Coexpression

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KEGG Info

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
gma03083	Polycomb repressive complex	4
gma04120	Ubiquitin mediated proteolysis	4
gma04141	Protein processing in endoplasmic reticulum	4
gma00564	Glycerophospholipid metabolism	2
gma00592	alpha-Linolenic acid metabolism	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
gma00564	Glycerophospholipid metabolism	2
gma00592	alpha-Linolenic acid metabolism	2
gma04075	Plant hormone signal transduction	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
mtr04626	Plant-pathogen interaction	4
mtr04016	MAPK signaling pathway - plant	3

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
mtr04016	MAPK signaling pathway - plant	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
ppo00500	Starch and sucrose metabolism	5

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
vvi04075	Plant hormone signal transduction	2
vvi04626	Plant-pathogen interaction	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
ghi00020	Citrate cycle (TCA cycle)	2
ghi00310	Lysine degradation	2
ghi00380	Tryptophan metabolism	2
ghi00785	Lipoic acid metabolism	2
ghi01200	Carbon metabolism	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
ghi04075	Plant hormone signal transduction	4
ghi00020	Citrate cycle (TCA cycle)	2
ghi00310	Lysine degradation	2
ghi00380	Tryptophan metabolism	2
ghi00785	Lipoic acid metabolism	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
bna04016	MAPK signaling pathway - plant	4
bna04075	Plant hormone signal transduction	4

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
bna00600	Sphingolipid metabolism	3

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
bna00600	Sphingolipid metabolism	3

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
sly00920	Sulfur metabolism	3
sly01320	Sulfur cycle	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
sot04120	Ubiquitin mediated proteolysis	3
sot04075	Plant hormone signal transduction	2
sot04141	Protein processing in endoplasmic reticulum	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
nta04120	Ubiquitin mediated proteolysis	5
nta03420	Nucleotide excision repair	2
nta04141	Protein processing in endoplasmic reticulum	2
nta00600	Sphingolipid metabolism	2
nta04382	Cornified envelope formation	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
nta04120	Ubiquitin mediated proteolysis	4
nta00600	Sphingolipid metabolism	2
nta04382	Cornified envelope formation	2
nta03013	Nucleocytoplasmic transport	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
nta04075	Plant hormone signal transduction	3

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
osa03040	Spliceosome	2
osa04075	Plant hormone signal transduction	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
zma04016	MAPK signaling pathway - plant	4
zma04075	Plant hormone signal transduction	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
zma04144	Endocytosis	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
zma04141	Protein processing in endoplasmic reticulum	3
zma00513	Various types of N-glycan biosynthesis	2
zma04144	Endocytosis	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
tae04626	Plant-pathogen interaction	4
tae04141	Protein processing in endoplasmic reticulum	2
tae04145	Phagosome	2
tae04148	Efferocytosis	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
tae00592	alpha-Linolenic acid metabolism	2
tae04075	Plant hormone signal transduction	2
tae04626	Plant-pathogen interaction	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
hvu04144	Endocytosis	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
sbi03008	Ribosome biogenesis in eukaryotes	2
sbi04712	Circadian rhythm - plant	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
sbi04136	Autophagy - other	3
sbi04144	Endocytosis	3
sbi04620	Toll-like receptor signaling pathway	2
sbi04148	Efferocytosis	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
cre04136	Autophagy - other	2

Expression

Expression pattern

Entrez Gene ID^*

100783451

100819720

11411270

11428642

7488022

7490326

824762

103830029

103841497

103865772

100248837

100262172

121208152

107920218

107918365

106450261

106352902

106368123

102609403

102628931

101252994

101257861

102600526

102583105

107828293

107812956

107829643

4327404

4339051

103635784

100216776

100282077

123059667

123079643

123071301

123445067

123444980

8057753

8061792

100829084

100828475

5725213

The preparation time of this page was 0.2 [sec].


Species	gma	mtr	ppo	ath	bra	vvi	ghi	bna	cit	sly	sot	nta	osa	zma	tae	hvu	sbi	bdi	cre
Paralog	3	2	2	1	3	2	3	3	2	2	2	3	2	3	3	2	2	2	1

Select Species**

Orthologous genes in OrthoFinder**

Top 50 coexpressed genes to 100783451 (gma-u.5 coexpression data)

Top 50 enrichment test to 100783451 (gma-u.5 coexpression data)

Select Species^**

Orthologous genes in OrthoFinder^**