ATTED-II : GeneCoexpression result

Species	Gene	Description
gma-u.5	100819720	CTD nuclear envelope phosphatase 1 homolog
gma-r.7	100819720	CTD nuclear envelope phosphatase 1 homolog
gma-m.5	100819720	CTD nuclear envelope phosphatase 1 homolog
gma-u.5	100783451	CTD small phosphatase-like protein 2-like
mtr-u.5	11411270	carboxy-terminal domain RNA polymerase II polypeptide A small phosphatase 1
mtr-u.5	11428642	carboxy-terminal domain RNA polymerase II polypeptide A small phosphatase 1
ppo-u.5	7488022	uncharacterized LOC7488022
ppo-u.5	7487322	uncharacterized LOC7487322
ath-u.5	AT3G55960	Haloacid dehalogenase-like hydrolase (HAD) superfamily protein
vvi-u.5	100248837	uncharacterized LOC100248837
vvi-u.5	100262172	uncharacterized LOC100262172
sly-u.5	101252994	uncharacterized LOC101252994
sly-u.5	101257861	uncharacterized LOC101257861
osa-u.5	4327404	uncharacterized LOC4327404
osa-u.5	4339051	uncharacterized LOC4339051
zma-u.5	103635784	probable phosphatase PSR2
zma-u.5	100216776	uncharacterized LOC100216776
zma-u.5	100282077	uncharacterized LOC100282077

Annotation

functional annotation

KEGG

GO BP

GO CC

GO MF

GO:0004721 [list] [network] phosphoprotein phosphatase activity

(268 genes)

IEA

Protein

XP_014622615.2 [sequence] [blastp]

Subcellular
localization
wolf

chlo 3, nucl 1, cyto 1, E.R. 1, cyto_nucl 1, cyto_E.R. 1

(predict for XP_014622615.2)

Subcellular
localization
TargetP

mito 5

(predict for XP_014622615.2)

Gene expression

All samples

[Expression pattern]

Tissue specificity^*

Coexpression

	Gene	Function	KEGG					Entrez Gene ID	Other ID	Link	Target			Reference
	Gene	Function	KEGG					Entrez Gene ID	Other ID	Link	gma-u.5 for 100819720 .	gma-r.7 for 100819720 .	gma-m.5 for 100819720 .	gma-u.5 for 100783451 .	mtr-u.5 for 11411270 .	mtr-u.5 for 11428642 .	ppo-u.5 for 7488022 .	ppo-u.5 for 7487322 .	ath-u.5 for AT3G55960 .	vvi-u.5 for 100248837 .	vvi-u.5 for 100262172 .	sly-u.5 for 101252994 .	sly-u.5 for 101257861 .	osa-u.5 for 4327404 .	osa-u.5 for 4339051 .	zma-u.5 for 103635784 .	zma-u.5 for 100216776 .	zma-u.5 for 100282077 .

Ortholog

Ortholog ID: 3115

Species

ath

gma

sly

osa

zma

bra

vvi

ppo

mtr

tae

hvu

ghi

bna

cre

sbi

sot

cit

bdi

nta

Symbol

Function^*

Haloacid dehalogenase-like hydrolase (HAD) superfamily protein

CTD nuclear envelope phosphatase 1 homolog

CTD small phosphatase-like protein 2-like

uncharacterized LOC101252994

uncharacterized LOC101257861

uncharacterized LOC4339051

uncharacterized LOC4327404

probable phosphatase PSR2

uncharacterized LOC100216776

CTD small phosphatase-like protein

carboxy-terminal domain RNA polymerase II polypeptide A small phosphatase 1

uncharacterized LOC100248837

uncharacterized LOC100262172

uncharacterized LOC7488022

carboxy-terminal domain RNA polymerase II polypeptide A small phosphatase 1

CTD nuclear envelope phosphatase 1 homolog

CTD small phosphatase-like protein

CTD nuclear envelope phosphatase 1

probable phosphatase PSR2

CTD small phosphatase-like protein

uncharacterized protein

CTD nuclear envelope phosphatase 1 homolog

carboxy-terminal domain RNA polymerase II polypeptide A small phosphatase 1-like

CTD nuclear envelope phosphatase 1 homolog

uncharacterized LOC102628931

uncharacterized LOC102609403

CTD small phosphatase-like protein

uncharacterized LOC100829084

uncharacterized LOC107828293

uncharacterized LOC107812956

Coexmap

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Coexpression

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KEGG Info

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
gma00564	Glycerophospholipid metabolism	2
gma00592	alpha-Linolenic acid metabolism	2
gma04075	Plant hormone signal transduction	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
gma03083	Polycomb repressive complex	4
gma04120	Ubiquitin mediated proteolysis	4
gma04141	Protein processing in endoplasmic reticulum	4
gma00564	Glycerophospholipid metabolism	2
gma00592	alpha-Linolenic acid metabolism	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
sly00920	Sulfur metabolism	3
sly01320	Sulfur cycle	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
osa03040	Spliceosome	2
osa04075	Plant hormone signal transduction	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
zma04016	MAPK signaling pathway - plant	4
zma04075	Plant hormone signal transduction	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
zma04144	Endocytosis	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
vvi04075	Plant hormone signal transduction	2
vvi04626	Plant-pathogen interaction	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
ppo00500	Starch and sucrose metabolism	5

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
mtr04016	MAPK signaling pathway - plant	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
mtr04626	Plant-pathogen interaction	4
mtr04016	MAPK signaling pathway - plant	3

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
tae04626	Plant-pathogen interaction	4
tae04141	Protein processing in endoplasmic reticulum	2
tae04145	Phagosome	2
tae04148	Efferocytosis	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
hvu04144	Endocytosis	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
ghi04075	Plant hormone signal transduction	4
ghi00020	Citrate cycle (TCA cycle)	2
ghi00310	Lysine degradation	2
ghi00380	Tryptophan metabolism	2
ghi00785	Lipoic acid metabolism	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
bna00600	Sphingolipid metabolism	3

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
bna04016	MAPK signaling pathway - plant	4
bna04075	Plant hormone signal transduction	4

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
cre04136	Autophagy - other	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
sbi04136	Autophagy - other	3
sbi04144	Endocytosis	3
sbi04620	Toll-like receptor signaling pathway	2
sbi04148	Efferocytosis	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
sbi03008	Ribosome biogenesis in eukaryotes	2
sbi04712	Circadian rhythm - plant	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
sot04120	Ubiquitin mediated proteolysis	3
sot04075	Plant hormone signal transduction	2
sot04141	Protein processing in endoplasmic reticulum	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
nta04120	Ubiquitin mediated proteolysis	5
nta03420	Nucleotide excision repair	2
nta04141	Protein processing in endoplasmic reticulum	2
nta00600	Sphingolipid metabolism	2
nta04382	Cornified envelope formation	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
nta04120	Ubiquitin mediated proteolysis	4
nta00600	Sphingolipid metabolism	2
nta04382	Cornified envelope formation	2
nta03013	Nucleocytoplasmic transport	2

Expression

Expression pattern

Entrez Gene ID^*

824762

100819720

100783451

101252994

101257861

4339051

4327404

103635784

100216776

103830029

103865772

100248837

100262172

7488022

11428642

11411270

123071301

123059667

123445067

123444980

107918365

121208152

106352902

106450261

5725213

8061792

8057753

102583105

102600526

102628931

102609403

100828475

100829084

107828293

107812956

Select Species^**

Orthologous genes in OrthoFinder^**

Top 50 coexpressed genes to 100819720 (gma-u.5 coexpression data)

Top 50 enrichment test to 100819720 (gma-u.5 coexpression data)


Species	gma	mtr	ppo	ath	vvi	sly	osa	zma	hvu	sot	tae	nta	bra	cit	ghi	bna	bdi	sbi	cre
Paralog	4	2	2	1	2	2	2	3	0	0	0	0	0	0	0	0	0	0	0

Select Species**

Orthologous genes in OrthoFinder**

Top 50 coexpressed genes to 100819720 (gma-u.5 coexpression data)

Top 50 enrichment test to 100819720 (gma-u.5 coexpression data)

Select Species^**

Orthologous genes in OrthoFinder^**