ATTED-II : GeneCoexpression result

Species	Gene	Description
bra-r.6	103865772	carboxy-terminal domain RNA polymerase II polypeptide A small phosphatase 1
ath-u.5	AT3G55960	Haloacid dehalogenase-like hydrolase (HAD) superfamily protein
gma-u.5	100819720	CTD nuclear envelope phosphatase 1 homolog
gma-u.5	100783451	CTD small phosphatase-like protein 2-like
vvi-u.5	100262172	uncharacterized LOC100262172
vvi-u.5	100248837	uncharacterized LOC100248837
ppo-u.5	7488022	uncharacterized LOC7488022
ppo-u.5	7490326	uncharacterized LOC7490326
ppo-u.5	7487322	uncharacterized LOC7487322
mtr-u.5	11428642	carboxy-terminal domain RNA polymerase II polypeptide A small phosphatase 1
mtr-u.5	11411270	carboxy-terminal domain RNA polymerase II polypeptide A small phosphatase 1
sly-u.5	101257861	uncharacterized LOC101257861
sly-u.5	101252994	uncharacterized LOC101252994
osa-u.5	4327404	uncharacterized LOC4327404
osa-u.5	4339051	uncharacterized LOC4339051
zma-u.5	103635784	probable phosphatase PSR2
zma-u.5	100282077	uncharacterized LOC100282077
zma-u.5	100216776	uncharacterized LOC100216776

Annotation

functional annotation

KEGG

GO BP

GO CC

GO MF

GO:0004721 [list] [network] phosphoprotein phosphatase activity

(224 genes)

IEA

Protein

XP_009141872.1 [sequence] [blastp]

Subcellular
localization
wolf

cyto 6, nucl 4

(predict for XP_009141872.1)

Subcellular
localization
TargetP

other 5, mito 3

(predict for XP_009141872.1)

Gene expression

All samples

[Expression pattern]

Tissue specificity^*

Coexpression

	Gene	Function	KEGG					Entrez Gene ID	Other ID	Link	Target	Reference
	Gene	Function	KEGG					Entrez Gene ID	Other ID	Link	bra-r.6 for 103865772	ath-u.5 for AT3G55960	gma-u.5 for 100819720	gma-u.5 for 100783451	vvi-u.5 for 100262172	vvi-u.5 for 100248837	ppo-u.5 for 7488022	ppo-u.5 for 7490326	ppo-u.5 for 7487322	mtr-u.5 for 11428642	mtr-u.5 for 11411270	sly-u.5 for 101257861	sly-u.5 for 101252994	osa-u.5 for 4327404	osa-u.5 for 4339051	zma-u.5 for 103635784	zma-u.5 for 100282077	zma-u.5 for 100216776

Ortholog

Ortholog ID: 3115

Species

bra

bna

ath

ghi

cit

gma

vvi

ppo

mtr

sly

sot

nta

osa

zma

tae

hvu

sbi

bdi

cre

Symbol

Function^*

CTD small phosphatase-like protein

carboxy-terminal domain RNA polymerase II polypeptide A small phosphatase 1

CTD small phosphatase-like protein

Haloacid dehalogenase-like hydrolase (HAD) superfamily protein

CTD nuclear envelope phosphatase 1

probable phosphatase PSR2

uncharacterized LOC102628931

uncharacterized LOC102609403

CTD nuclear envelope phosphatase 1 homolog

CTD small phosphatase-like protein 2-like

uncharacterized LOC100248837

uncharacterized LOC100262172

uncharacterized LOC7488022

carboxy-terminal domain RNA polymerase II polypeptide A small phosphatase 1

uncharacterized LOC101252994

uncharacterized LOC101257861

carboxy-terminal domain RNA polymerase II polypeptide A small phosphatase 1-like

CTD nuclear envelope phosphatase 1 homolog

uncharacterized LOC107828293

uncharacterized LOC107812956

uncharacterized LOC4339051

uncharacterized LOC4327404

probable phosphatase PSR2

uncharacterized LOC100216776

carboxy-terminal domain RNA polymerase II polypeptide A small phosphatase 1

CTD nuclear envelope phosphatase 1 homolog

CTD small phosphatase-like protein

CTD nuclear envelope phosphatase 1 homolog

CTD small phosphatase-like protein

uncharacterized LOC100829084

uncharacterized protein

Coexmap

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Coexpression

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KEGG Info

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
bna00600	Sphingolipid metabolism	3

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
bna04016	MAPK signaling pathway - plant	4
bna04075	Plant hormone signal transduction	4

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
ghi04075	Plant hormone signal transduction	4
ghi00020	Citrate cycle (TCA cycle)	2
ghi00310	Lysine degradation	2
ghi00380	Tryptophan metabolism	2
ghi00785	Lipoic acid metabolism	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
gma00564	Glycerophospholipid metabolism	2
gma00592	alpha-Linolenic acid metabolism	2
gma04075	Plant hormone signal transduction	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
gma03083	Polycomb repressive complex	4
gma04120	Ubiquitin mediated proteolysis	4
gma04141	Protein processing in endoplasmic reticulum	4
gma00564	Glycerophospholipid metabolism	2
gma00592	alpha-Linolenic acid metabolism	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
vvi04075	Plant hormone signal transduction	2
vvi04626	Plant-pathogen interaction	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
ppo00500	Starch and sucrose metabolism	5

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
mtr04016	MAPK signaling pathway - plant	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
mtr04626	Plant-pathogen interaction	4
mtr04016	MAPK signaling pathway - plant	3

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
sly00920	Sulfur metabolism	3
sly01320	Sulfur cycle	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
sot04120	Ubiquitin mediated proteolysis	3
sot04075	Plant hormone signal transduction	2
sot04141	Protein processing in endoplasmic reticulum	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
nta04120	Ubiquitin mediated proteolysis	5
nta03420	Nucleotide excision repair	2
nta04141	Protein processing in endoplasmic reticulum	2
nta00600	Sphingolipid metabolism	2
nta04382	Cornified envelope formation	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
nta04120	Ubiquitin mediated proteolysis	4
nta00600	Sphingolipid metabolism	2
nta04382	Cornified envelope formation	2
nta03013	Nucleocytoplasmic transport	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
osa03040	Spliceosome	2
osa04075	Plant hormone signal transduction	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
zma04016	MAPK signaling pathway - plant	4
zma04075	Plant hormone signal transduction	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
zma04144	Endocytosis	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
tae04626	Plant-pathogen interaction	4
tae04141	Protein processing in endoplasmic reticulum	2
tae04145	Phagosome	2
tae04148	Efferocytosis	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
hvu04144	Endocytosis	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
sbi04136	Autophagy - other	3
sbi04144	Endocytosis	3
sbi04620	Toll-like receptor signaling pathway	2
sbi04148	Efferocytosis	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
sbi03008	Ribosome biogenesis in eukaryotes	2
sbi04712	Circadian rhythm - plant	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
cre04136	Autophagy - other	2

Expression

Expression pattern

Entrez Gene ID^*

103830029

103865772

106352902

106450261

824762

107918365

121208152

102628931

102609403

100819720

100783451

100248837

100262172

7488022

11428642

11411270

101252994

101257861

102583105

102600526

107828293

107812956

4339051

4327404

103635784

100216776

123071301

123059667

123445067

123444980

8061792

8057753

100828475

100829084

5725213

Select Species^**

Orthologous genes in OrthoFinder^**

Top 50 coexpressed genes to 103865772 (bra-r.6 coexpression data)

Top 50 enrichment test to 103865772 (bra-r.6 coexpression data)


Species	bra	ath	gma	vvi	ppo	mtr	sly	osa	zma	hvu	bna	cit	ghi	sbi	bdi	nta	tae	cre	sot
Paralog	1	1	2	2	3	2	2	2	3	0	0	0	0	0	0	0	0	0	0

Select Species**

Orthologous genes in OrthoFinder**

Top 50 coexpressed genes to 103865772 (bra-r.6 coexpression data)

Top 50 enrichment test to 103865772 (bra-r.6 coexpression data)

Select Species^**

Orthologous genes in OrthoFinder^**