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Orthologous genes in OrthoFinder**

Species Gene Description
 gma-u.5   100783660   gamma-secretase subunit APH1-like 
 gma-r.7   100783660   gamma-secretase subunit APH1-like 
 gma-m.5   100783660   gamma-secretase subunit APH1-like 
 gma-u.5   100794637   gamma-secretase subunit APH1-like 
 mtr-u.5   25492650   gamma-secretase subunit APH1-like 
 ppo-u.5   7469595   gamma-secretase subunit APH1-like 
 ath-u.5   AT2G31440   gamma-secretase subunit APH1-like protein 
 bra-r.6   103857373   gamma-secretase subunit APH1-like 
 bra-r.6   103844423   gamma-secretase subunit APH1-like 
 vvi-u.5   100252610   gamma-secretase subunit APH1-like 
 ghi-r.1   107927326   gamma-secretase subunit APH1-like 
 ghi-r.1   107934811   gamma-secretase subunit APH1-like 
 bna-r.1   106445699   gamma-secretase subunit APH1-like 
 bna-r.1   111201366   gamma-secretase subunit APH1-like 
 bna-r.1   111201285   gamma-secretase subunit APH1-like 
 cit-r.1   102617940   gamma-secretase subunit APH1-like 
 sly-u.5   101249370   gamma-secretase subunit APH1-like 
 sot-r.1   102593469   gamma-secretase subunit APH1-like 
 nta-r.1   107792930   gamma-secretase subunit APH1-like 
 nta-r.1   107832141   gamma-secretase subunit APH1-like 
 osa-u.5   4328988   gamma-secretase subunit APH1-like 
 zma-u.5   100283316   gamma-secretase subunit APH-1B 
 tae-r.2   123080846   gamma-secretase subunit APH1-like 
 tae-r.2   123072662   gamma-secretase subunit APH1-like 
 tae-r.2   123063541   gamma-secretase subunit APH1-like 
 hvu-r.1   123445424   gamma-secretase subunit APH1-like 
 hvu-r.1   123442149   gamma-secretase subunit APH1-like 
 hvu-r.1   123445598   gamma-secretase subunit APH1-like 
 sbi-r.1   8059094   gamma-secretase subunit APH1-like 
 bdi-r.1   100838492   gamma-secretase subunit APH1-like 
 cre-r.1   CHLRE_13g576300v5   uncharacterized protein 

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Top 50 coexpressed genes to 100783660 (gma-u.5 coexpression data)

 KEGG ID   Pathway name   #genes in coex list   #genes in genome   -log10(p)   Link to the KEGG* map 
(Multiple genes)

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Top 50 enrichment test to 100783660 (gma-u.5 coexpression data)

CoexMap"100783660"


gmaLOC100783660 | Entrez gene ID : 100783660      
Species gma mtr ppo ath bra vvi ghi bna cit sly sot nta osa zma tae hvu sbi bdi cre
Paralog 4 1 1 1 2 1 2 3 1 1 1 2 1 1 3 3 1 1 1
Show/Hide Columns:        



CoexMap
Chloroplast
Nucleus

functional annotation
KEGG
GO BP
GO:0043085 [list] [network] positive regulation of catalytic activity  (80 genes)  IEA  
GO:0016485 [list] [network] protein processing  (83 genes)  IEA  
GO CC
GO:0070765 [list] [network] gamma-secretase complex  (4 genes)  IEA  
GO:0005783 [list] [network] endoplasmic reticulum  (889 genes)  IEA  
GO:0016020 [list] [network] membrane  (5894 genes)  IEA  
GO MF
GO:0030674 [list] [network] protein-macromolecule adaptor activity  (357 genes)  IEA  
Protein XP_003537942.1 [sequence] [blastp]
XP_014619503.1 [sequence] [blastp]
XP_040862646.1 [sequence] [blastp]
Subcellular
localization
wolf
chlo 8,  cyto 1,  plas 1,  E.R. 1,  E.R._plas 1,  cyto_E.R. 1,  cyto_plas 1  (predict for XP_003537942.1)
chlo 9  (predict for XP_014619503.1)
chlo 9  (predict for XP_040862646.1)
Subcellular
localization
TargetP
scret 3  (predict for XP_003537942.1)
scret 3  (predict for XP_014619503.1)
scret 3  (predict for XP_040862646.1)
Gene expression
All samples [Expression pattern]
Tissue specificity*
Show Coexpressed Genes
Gene Function KEGG Entrez
Gene
ID		 Other ID Link Target Reference

gma-u.5
for
100783660
gma-r.7
for
100783660
gma-m.5
for
100783660
gma-u.5
for
100794637
mtr-u.5
for
25492650
ppo-u.5
for
7469595
ath-u.5
for
AT2G31440
bra-r.6
for
103857373
bra-r.6
for
103844423
vvi-u.5
for
100252610
ghi-r.1
for
107927326
ghi-r.1
for
107934811
bna-r.1
for
106445699
bna-r.1
for
111201366
bna-r.1
for
111201285
cit-r.1
for
102617940
sly-u.5
for
101249370
sot-r.1
for
102593469
nta-r.1
for
107792930
nta-r.1
for
107832141
osa-u.5
for
4328988
zma-u.5
for
100283316
tae-r.2
for
123080846
tae-r.2
for
123072662
tae-r.2
for
123063541
hvu-r.1
for
123445424
hvu-r.1
for
123442149
hvu-r.1
for
123445598
sbi-r.1
for
8059094
bdi-r.1
for
100838492
cre-r.1
for
CHLRE_13g576300v5


Ortholog ID: 7526
Species gma gma mtr ppo ath bra bra vvi ghi ghi bna bna bna cit sly sot nta nta osa zma tae tae tae hvu hvu hvu sbi bdi cre
Symbol LOC100783660 LOC100794637 LOC25492650 LOC7469595 AT2G31440 LOC103857373 LOC103844423 LOC100252610 LOC107927326 LOC107934811 LOC111201366 LOC111201285 LOC106437743 LOC102617940 LOC101249370 LOC102593469 LOC107792930 LOC107832141 LOC4328988 LOC100283316 LOC123080846 LOC123072662 LOC123063541 LOC123445424 LOC123442149 LOC123445598 LOC8059094 LOC100838492 CHLRE_13g576300v5
Function* gamma-secretase subunit APH1-like gamma-secretase subunit APH1-like gamma-secretase subunit APH1-like gamma-secretase subunit APH1-like gamma-secretase subunit APH1-like protein gamma-secretase subunit APH1-like gamma-secretase subunit APH1-like gamma-secretase subunit APH1-like gamma-secretase subunit APH1-like gamma-secretase subunit APH1-like gamma-secretase subunit APH1-like gamma-secretase subunit APH1-like gamma-secretase subunit APH1-like gamma-secretase subunit APH1-like gamma-secretase subunit APH1-like gamma-secretase subunit APH1-like gamma-secretase subunit APH1-like gamma-secretase subunit APH1-like gamma-secretase subunit APH1-like gamma-secretase subunit APH-1B gamma-secretase subunit APH1-like gamma-secretase subunit APH1-like gamma-secretase subunit APH1-like gamma-secretase subunit APH1-like gamma-secretase subunit APH1-like gamma-secretase subunit APH1-like gamma-secretase subunit APH1-like gamma-secretase subunit APH1-like uncharacterized protein
Coexmap

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Coexpression

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KEGG Info
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma04016 MAPK signaling pathway - plant 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ppo00190 Oxidative phosphorylation 2
ppo03013 Nucleocytoplasmic transport 2
ppo03015 mRNA surveillance pathway 2
ppo03040 Spliceosome 2
ppo04144 Endocytosis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ath03040 Spliceosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bra03040 Spliceosome 4
bra03020 RNA polymerase 2
bra03420 Nucleotide excision repair 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi00190 Oxidative phosphorylation 2
ghi04145 Phagosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi00190 Oxidative phosphorylation 2
ghi04145 Phagosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna00190 Oxidative phosphorylation 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna00190 Oxidative phosphorylation 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cit04141 Protein processing in endoplasmic reticulum 4
cit03060 Protein export 3
cit04145 Phagosome 3
cit00190 Oxidative phosphorylation 3
cit04144 Endocytosis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sot04144 Endocytosis 4
sot04142 Lysosome 3
sot05100 Bacterial invasion of epithelial cells 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta03010 Ribosome 3
nta03013 Nucleocytoplasmic transport 2
nta03015 mRNA surveillance pathway 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta03013 Nucleocytoplasmic transport 3
nta03015 mRNA surveillance pathway 3
nta00730 Thiamine metabolism 2
nta00740 Riboflavin metabolism 2
nta01240 Biosynthesis of cofactors 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
osa04144 Endocytosis 2
osa00510 N-Glycan biosynthesis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae04144 Endocytosis 3
tae00510 N-Glycan biosynthesis 2
tae00563 Glycosylphosphatidylinositol (GPI)-anchor biosynthesis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae04130 SNARE interactions in vesicular transport 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae02010 ABC transporters 3
tae04146 Peroxisome 3
tae04130 SNARE interactions in vesicular transport 2
tae00730 Thiamine metabolism 2
tae00740 Riboflavin metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
hvu04144 Endocytosis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
hvu04144 Endocytosis 2
hvu03008 Ribosome biogenesis in eukaryotes 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sbi03083 Polycomb repressive complex 2
sbi04120 Ubiquitin mediated proteolysis 2
sbi04141 Protein processing in endoplasmic reticulum 2
sbi03020 RNA polymerase 2
sbi03420 Nucleotide excision repair 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bdi03040 Spliceosome 2
bdi03018 RNA degradation 2
Expression Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern
Entrez Gene ID* 100783660 100794637 25492650 7469595 817702 103857373 103844423 100252610 107927326 107934811 111201366 111201285 106437743 102617940 101249370 102593469 107792930 107832141 4328988 100283316 123080846 123072662 123063541 123445424 123442149 123445598 8059094 100838492 5719239
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