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Orthologous genes in OrthoFinder**

Species Gene Description
 bdi-r.1   100838492   gamma-secretase subunit APH1-like 
 osa-u.5   4328988   gamma-secretase subunit APH1-like 
 zma-u.5   100283316   gamma-secretase subunit APH-1B 
 ath-u.5   AT2G31440   gamma-secretase subunit APH1-like protein 
 gma-u.5   100794637   gamma-secretase subunit APH1-like 
 gma-u.5   100783660   gamma-secretase subunit APH1-like 
 sly-u.5   101249370   gamma-secretase subunit APH1-like 
 vvi-u.5   100252610   gamma-secretase subunit APH1-like 
 ppo-u.5   7469595   gamma-secretase subunit APH1-like 
 mtr-u.5   25492650   gamma-secretase subunit APH1-like 

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Top 50 coexpressed genes to 100838492 (bdi-r.1 coexpression data)

 KEGG ID   Pathway name   #genes in coex list   #genes in genome   -log10(p)   Link to the KEGG* map 
(Multiple genes)

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Top 50 enrichment test to 100838492 (bdi-r.1 coexpression data)

CoexMap"100838492"


bdiLOC100838492 | Entrez gene ID : 100838492      
Species bdi osa zma ath gma sly vvi ppo mtr hvu bna cit bra ghi sbi nta tae cre sot
Paralog 1 1 1 1 2 1 1 1 1 0 0 0 0 0 0 0 0 0 0
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CoexMap
Chloroplast
Nucleus

functional annotation
KEGG
GO BP
GO:0016485 [list] [network] protein processing  (45 genes)  IEA  
GO:0043085 [list] [network] positive regulation of catalytic activity  (52 genes)  IEA  
GO CC
GO:0070765 [list] [network] gamma-secretase complex  (2 genes)  IEA  
GO:0005783 [list] [network] endoplasmic reticulum  (470 genes)  IEA  
GO:0016020 [list] [network] membrane  (3014 genes)  IEA  
GO MF
GO:0030674 [list] [network] protein-macromolecule adaptor activity  (178 genes)  IEA  
Protein XP_003572373.1 [sequence] [blastp]
Subcellular
localization
wolf
chlo 6,  vacu 1,  plas 1,  extr 1,  E.R. 1,  golg 1,  golg_plas 1,  E.R._plas 1  (predict for XP_003572373.1)
Subcellular
localization
TargetP
scret 5,  other 4  (predict for XP_003572373.1)
Gene expression
All samples [Expression pattern]
Tissue specificity*
Show Coexpressed Genes
Gene Function KEGG Entrez
Gene
ID		 Other ID Link Target Reference

bdi-r.1
for
100838492
osa-u.5
for
4328988
zma-u.5
for
100283316
ath-u.5
for
AT2G31440
gma-u.5
for
100794637
gma-u.5
for
100783660
sly-u.5
for
101249370
vvi-u.5
for
100252610
ppo-u.5
for
7469595
mtr-u.5
for
25492650


Ortholog ID: 7526
Species bdi tae tae hvu hvu osa zma sbi ath gma gma sly bra bra vvi ppo mtr ghi ghi bna bna sot cit nta nta cre
Symbol LOC100838492 LOC123080846 LOC123072662 LOC123445598 LOC123445424 LOC4328988 LOC100283316 LOC8059094 AT2G31440 LOC100794637 LOC100783660 LOC101249370 LOC103844423 LOC103857373 LOC100252610 LOC7469595 LOC25492650 LOC107927326 LOC107934811 LOC111201285 LOC111201366 LOC102593469 LOC102617940 LOC107792930 LOC107832141 CHLRE_13g576300v5
Function* gamma-secretase subunit APH1-like gamma-secretase subunit APH1-like gamma-secretase subunit APH1-like gamma-secretase subunit APH1-like gamma-secretase subunit APH1-like gamma-secretase subunit APH1-like gamma-secretase subunit APH-1B gamma-secretase subunit APH1-like gamma-secretase subunit APH1-like protein gamma-secretase subunit APH1-like gamma-secretase subunit APH1-like gamma-secretase subunit APH1-like gamma-secretase subunit APH1-like gamma-secretase subunit APH1-like gamma-secretase subunit APH1-like gamma-secretase subunit APH1-like gamma-secretase subunit APH1-like gamma-secretase subunit APH1-like gamma-secretase subunit APH1-like gamma-secretase subunit APH1-like gamma-secretase subunit APH1-like gamma-secretase subunit APH1-like gamma-secretase subunit APH1-like gamma-secretase subunit APH1-like gamma-secretase subunit APH1-like uncharacterized protein
Coexmap

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Coexpression

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KEGG Info
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bdi03040 Spliceosome 2
bdi03018 RNA degradation 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae04144 Endocytosis 3
tae00510 N-Glycan biosynthesis 2
tae00563 Glycosylphosphatidylinositol (GPI)-anchor biosynthesis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae04130 SNARE interactions in vesicular transport 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
hvu04144 Endocytosis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
osa04144 Endocytosis 2
osa00510 N-Glycan biosynthesis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sbi03083 Polycomb repressive complex 2
sbi04120 Ubiquitin mediated proteolysis 2
sbi04141 Protein processing in endoplasmic reticulum 2
sbi03020 RNA polymerase 2
sbi03420 Nucleotide excision repair 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ath03040 Spliceosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma04016 MAPK signaling pathway - plant 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bra03040 Spliceosome 4
bra03020 RNA polymerase 2
bra03420 Nucleotide excision repair 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ppo00190 Oxidative phosphorylation 2
ppo03013 Nucleocytoplasmic transport 2
ppo03015 mRNA surveillance pathway 2
ppo03040 Spliceosome 2
ppo04144 Endocytosis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi00190 Oxidative phosphorylation 2
ghi04145 Phagosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi00190 Oxidative phosphorylation 2
ghi04145 Phagosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna00190 Oxidative phosphorylation 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna00190 Oxidative phosphorylation 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sot04144 Endocytosis 4
sot04142 Lysosome 3
sot05100 Bacterial invasion of epithelial cells 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cit04141 Protein processing in endoplasmic reticulum 4
cit03060 Protein export 3
cit04145 Phagosome 3
cit00190 Oxidative phosphorylation 3
cit04144 Endocytosis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta03010 Ribosome 3
nta03013 Nucleocytoplasmic transport 2
nta03015 mRNA surveillance pathway 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta03013 Nucleocytoplasmic transport 3
nta03015 mRNA surveillance pathway 3
nta00730 Thiamine metabolism 2
nta00740 Riboflavin metabolism 2
nta01240 Biosynthesis of cofactors 2
Expression Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern
Entrez Gene ID* 100838492 123080846 123072662 123445598 123445424 4328988 100283316 8059094 817702 100794637 100783660 101249370 103844423 103857373 100252610 7469595 25492650 107927326 107934811 111201285 111201366 102593469 102617940 107792930 107832141 5719239
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