ATTED-II : GeneCoexpression result

Species	Gene	Description
gma-u.5	100788511	uncharacterized LOC100788511
gma-r.7	100788511	uncharacterized LOC100788511
gma-m.5	100788511	uncharacterized LOC100788511
gma-u.5	100780104	uncharacterized LOC100780104
mtr-u.5	11431505	uncharacterized LOC11431505
ppo-u.5	7458378	uncharacterized LOC7458378
ppo-u.5	7468650	uncharacterized LOC7468650
ath-u.5	AT2G25320	TRAF-like family protein
vvi-u.5	100259525	uncharacterized LOC100259525
sly-u.5	101267123	uncharacterized LOC101267123
osa-u.5	4329970	uncharacterized LOC4329970
zma-u.5	103655564	uncharacterized LOC103655564

functional annotation

KEGG

GO BP

GO CC

GO MF

GO:0005515 [list] [network] protein binding

(7243 genes)

IEA

Protein

XP_003527787.1 [sequence] [blastp]

Subcellular
localization
wolf

nucl 8, chlo 1

(predict for XP_003527787.1)

Subcellular
localization
TargetP

chlo 8

(predict for XP_003527787.1)

Gene expression

All samples

[Expression pattern]

Tissue specificity^*

	Gene	Function	KEGG					Entrez Gene ID	Other ID	Link	Target			Reference
	Gene	Function	KEGG					Entrez Gene ID	Other ID	Link	gma-u.5 for 100788511	gma-r.7 for 100788511	gma-m.5 for 100788511	gma-u.5 for 100780104	mtr-u.5 for 11431505	ppo-u.5 for 7458378	ppo-u.5 for 7468650	ath-u.5 for AT2G25320	vvi-u.5 for 100259525	sly-u.5 for 101267123	osa-u.5 for 4329970	zma-u.5 for 103655564

Ortholog ID: 6501

Species

gma

mtr

ppo

ath

bra

vvi

ghi

bna

cit

sly

sot

nta

osa

zma

tae

hvu

sbi

bdi

Symbol

Function^*

uncharacterized LOC100788511

uncharacterized LOC100780104

uncharacterized LOC11431505

uncharacterized LOC7458378

uncharacterized LOC7468650

TRAF-like family protein

uncharacterized LOC103864665

uncharacterized LOC103842192

uncharacterized LOC100259525

uncharacterized LOC107906867

uncharacterized LOC107906868

uncharacterized LOC106363677

uncharacterized LOC106446692

uncharacterized LOC102629875

uncharacterized LOC101267123

uncharacterized LOC102581430

uncharacterized LOC107764257

uncharacterized LOC107795028

uncharacterized LOC4329970

uncharacterized LOC103655564

uncharacterized LOC123144815

uncharacterized LOC123137458

uncharacterized LOC123406227

uncharacterized LOC8059681

uncharacterized LOC100836358

Coexmap

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Coexpression

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KEGG Info

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
gma04148	Efferocytosis	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
gma04142	Lysosome	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
ppo03082	ATP-dependent chromatin remodeling	3
ppo03083	Polycomb repressive complex	2
ppo03250	Viral life cycle - HIV-1	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
ppo04120	Ubiquitin mediated proteolysis	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
ath04120	Ubiquitin mediated proteolysis	3

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
bra03040	Spliceosome	3

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
vvi04120	Ubiquitin mediated proteolysis	4

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
bna04141	Protein processing in endoplasmic reticulum	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
bna04141	Protein processing in endoplasmic reticulum	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
cit03040	Spliceosome	4
cit04120	Ubiquitin mediated proteolysis	3
cit03015	mRNA surveillance pathway	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
sly03040	Spliceosome	4
sly04120	Ubiquitin mediated proteolysis	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
sot03040	Spliceosome	6

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
nta03250	Viral life cycle - HIV-1	2
nta03082	ATP-dependent chromatin remodeling	2
nta03040	Spliceosome	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
nta03250	Viral life cycle - HIV-1	2
nta03040	Spliceosome	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
osa03018	RNA degradation	3
osa03013	Nucleocytoplasmic transport	3
osa04075	Plant hormone signal transduction	2
osa04120	Ubiquitin mediated proteolysis	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
zma03082	ATP-dependent chromatin remodeling	2
zma04120	Ubiquitin mediated proteolysis	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
tae03082	ATP-dependent chromatin remodeling	4
tae03460	Fanconi anemia pathway	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
tae03440	Homologous recombination	3
tae04120	Ubiquitin mediated proteolysis	3
tae03460	Fanconi anemia pathway	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
sbi03040	Spliceosome	6

Expression

Expression pattern

Entrez Gene ID^*

100788511

100780104

11431505

7458378

7468650

817070

103864665

103842192

100259525

107906867

107906868

106363677

106446692

102629875

101267123

102581430

107764257

107795028

4329970

103655564

123144815

123137458

123406227

8059681

100836358

Select Species^**

Orthologous genes in OrthoFinder^**

Top 50 coexpressed genes to 100788511 (gma-u.5 coexpression data)

Top 50 enrichment test to 100788511 (gma-u.5 coexpression data)


Species	gma	mtr	ppo	ath	vvi	sly	osa	zma	bdi	hvu	bra	cit	bna	sbi	ghi	sot	nta	cre	tae
Paralog	4	1	2	1	1	1	1	1	0	0	0	0	0	0	0	0	0	0	0

Select Species**

Orthologous genes in OrthoFinder**

Top 50 coexpressed genes to 100788511 (gma-u.5 coexpression data)

Top 50 enrichment test to 100788511 (gma-u.5 coexpression data)

Select Species^**

Orthologous genes in OrthoFinder^**