ATTED-II : GeneCoexpression result

Species	Gene	Description
ghi-r.1	107906867	uncharacterized LOC107906867
ghi-r.1	121203175	uncharacterized LOC121203175
ghi-r.1	107958913	uncharacterized LOC107958913
ghi-r.1	107906868	uncharacterized LOC107906868
ath-u.5	AT2G25320	TRAF-like family protein
bra-r.6	103864665	uncharacterized LOC103864665
bra-r.6	103842192	uncharacterized LOC103842192
bna-r.1	106363677	uncharacterized LOC106363677
bna-r.1	106446692	uncharacterized LOC106446692
bna-r.1	106394077	uncharacterized LOC106394077
cit-r.1	102629875	uncharacterized LOC102629875
gma-u.5	100788511	uncharacterized LOC100788511
gma-u.5	100780104	uncharacterized LOC100780104
vvi-u.5	100259525	uncharacterized LOC100259525
ppo-u.5	7468650	uncharacterized LOC7468650
ppo-u.5	7458378	uncharacterized LOC7458378
mtr-u.5	11431505	uncharacterized LOC11431505
sly-u.5	101267123	uncharacterized LOC101267123
sot-r.1	102581430	uncharacterized LOC102581430
nta-r.1	107778752	uncharacterized LOC107778752
nta-r.1	107764257	uncharacterized LOC107764257
nta-r.1	107795028	uncharacterized LOC107795028
osa-u.5	4329970	uncharacterized LOC4329970
zma-u.5	103655564	uncharacterized LOC103655564
tae-r.2	123144815	uncharacterized LOC123144815
tae-r.2	123137458	uncharacterized LOC123137458
tae-r.2	123127782	uncharacterized LOC123127782
hvu-r.1	123406227	uncharacterized LOC123406227
sbi-r.1	8059681	uncharacterized LOC8059681
bdi-r.1	100836358	uncharacterized LOC100836358

Annotation

functional annotation

KEGG

GO BP

GO CC

GO MF

GO:0005515 [list] [network] protein binding

(10797 genes)

IEA

Protein

XP_016689486.2 [sequence] [blastp]

Subcellular
localization
wolf

nucl 7, chlo 1, vacu 1, cysk 1, chlo_mito 1

(predict for XP_016689486.2)

Subcellular
localization
TargetP

chlo 9

(predict for XP_016689486.2)

Gene expression

All samples

[Expression pattern]

Tissue specificity^*

Coexpression

	Gene	Function	KEGG					Entrez Gene ID	Other ID	Link	Target	Reference
	Gene	Function	KEGG					Entrez Gene ID	Other ID	Link	ghi-r.1 for 107906867	ghi-r.1 for 121203175	ghi-r.1 for 107958913	ghi-r.1 for 107906868	ath-u.5 for AT2G25320	bra-r.6 for 103864665	bra-r.6 for 103842192	bna-r.1 for 106363677	bna-r.1 for 106446692	bna-r.1 for 106394077	cit-r.1 for 102629875	gma-u.5 for 100788511	gma-u.5 for 100780104	vvi-u.5 for 100259525	ppo-u.5 for 7468650	ppo-u.5 for 7458378	mtr-u.5 for 11431505	sly-u.5 for 101267123	sot-r.1 for 102581430	nta-r.1 for 107778752	nta-r.1 for 107764257	nta-r.1 for 107795028	osa-u.5 for 4329970	zma-u.5 for 103655564	tae-r.2 for 123144815	tae-r.2 for 123137458	tae-r.2 for 123127782	hvu-r.1 for 123406227	sbi-r.1 for 8059681	bdi-r.1 for 100836358

Ortholog

Ortholog ID: 6501

Species

ghi

ath

bra

bna

cit

gma

vvi

ppo

mtr

sly

sot

nta

osa

zma

tae

hvu

sbi

bdi

Symbol

Function^*

uncharacterized LOC107906867

uncharacterized LOC107958913

uncharacterized LOC107906868

TRAF-like family protein

uncharacterized LOC103864665

uncharacterized LOC103842192

uncharacterized LOC106363677

uncharacterized LOC106446692

uncharacterized LOC106415037

uncharacterized LOC102629875

uncharacterized LOC100788511

uncharacterized LOC100780104

uncharacterized LOC100259525

uncharacterized LOC7468650

uncharacterized LOC7458378

uncharacterized LOC11431505

uncharacterized LOC101267123

uncharacterized LOC102581430

uncharacterized LOC107764257

uncharacterized LOC107795028

uncharacterized LOC107802227

uncharacterized LOC4329970

uncharacterized LOC103655564

uncharacterized LOC123144815

uncharacterized LOC123137458

uncharacterized LOC123127782

uncharacterized LOC123406227

uncharacterized LOC8059681

uncharacterized LOC100836358

Coexmap

Please wait a moment.

Coexpression

Please wait a moment.

KEGG Info

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
ath04120	Ubiquitin mediated proteolysis	3

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
bra03040	Spliceosome	3

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
bna04141	Protein processing in endoplasmic reticulum	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
bna04141	Protein processing in endoplasmic reticulum	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
bna04141	Protein processing in endoplasmic reticulum	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
cit03040	Spliceosome	4
cit04120	Ubiquitin mediated proteolysis	3
cit03015	mRNA surveillance pathway	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
gma04148	Efferocytosis	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
gma04142	Lysosome	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
vvi04120	Ubiquitin mediated proteolysis	4

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
ppo04120	Ubiquitin mediated proteolysis	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
ppo03082	ATP-dependent chromatin remodeling	3
ppo03083	Polycomb repressive complex	2
ppo03250	Viral life cycle - HIV-1	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
sly03040	Spliceosome	4
sly04120	Ubiquitin mediated proteolysis	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
sot03040	Spliceosome	6

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
nta03250	Viral life cycle - HIV-1	2
nta03082	ATP-dependent chromatin remodeling	2
nta03040	Spliceosome	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
nta03250	Viral life cycle - HIV-1	2
nta03040	Spliceosome	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
nta04120	Ubiquitin mediated proteolysis	2
nta04148	Efferocytosis	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
osa03018	RNA degradation	3
osa03013	Nucleocytoplasmic transport	3
osa04075	Plant hormone signal transduction	2
osa04120	Ubiquitin mediated proteolysis	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
zma03082	ATP-dependent chromatin remodeling	2
zma04120	Ubiquitin mediated proteolysis	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
tae03082	ATP-dependent chromatin remodeling	4
tae03460	Fanconi anemia pathway	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
tae03440	Homologous recombination	3
tae04120	Ubiquitin mediated proteolysis	3
tae03460	Fanconi anemia pathway	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
tae03082	ATP-dependent chromatin remodeling	3
tae03013	Nucleocytoplasmic transport	2
tae03015	mRNA surveillance pathway	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
sbi03040	Spliceosome	6

Expression

Expression pattern

Entrez Gene ID^*

107906867

107958913

107906868

817070

103864665

103842192

106363677

106446692

106415037

102629875

100788511

100780104

100259525

7468650

7458378

11431505

101267123

102581430

107764257

107795028

107802227

4329970

103655564

123144815

123137458

123127782

123406227

8059681

100836358

Select Species^**

Orthologous genes in OrthoFinder^**

Top 50 coexpressed genes to 107906867 (ghi-r.1 coexpression data)

Top 50 enrichment test to 107906867 (ghi-r.1 coexpression data)


Species	ghi	ath	bra	bna	cit	gma	vvi	ppo	mtr	sly	sot	nta	osa	zma	tae	hvu	sbi	bdi	cre
Paralog	4	1	2	3	1	2	1	2	1	1	1	3	1	1	3	1	1	1	0

Select Species**

Orthologous genes in OrthoFinder**

Top 50 coexpressed genes to 107906867 (ghi-r.1 coexpression data)

Top 50 enrichment test to 107906867 (ghi-r.1 coexpression data)

Select Species^**

Orthologous genes in OrthoFinder^**