ATTED-II : GeneCoexpression result

Species	Gene	Description
ppo-u.5	7468650	uncharacterized LOC7468650
ppo-r.4	7468650	uncharacterized LOC7468650
ppo-u.5	7458378	uncharacterized LOC7458378
gma-u.5	100788511	uncharacterized LOC100788511
gma-u.5	100780104	uncharacterized LOC100780104
mtr-u.5	11431505	uncharacterized LOC11431505
ath-u.5	AT2G25320	TRAF-like family protein
vvi-u.5	100259525	uncharacterized LOC100259525
sly-u.5	101267123	uncharacterized LOC101267123
osa-u.5	4329970	uncharacterized LOC4329970
zma-u.5	103655564	uncharacterized LOC103655564

functional annotation

KEGG

GO BP

GO:0009058 [list] [network] biosynthetic process

(3363 genes)

IEA

GO CC

GO MF

GO:0030170 [list] [network] pyridoxal phosphate binding	(105 genes)	IEA
GO:0005515 [list] [network] protein binding	(4916 genes)	IEA
GO:0003824 [list] [network] catalytic activity	(9959 genes)	IEA

Protein

XP_024459197.2 [sequence] [blastp]
XP_024459198.2 [sequence] [blastp]

Subcellular
localization
wolf

nucl 4, plas 1, vacu 1, golg 1, golg_plas 1	(predict for XP_024459197.2)
nucl 4, plas 1, vacu 1, golg 1, golg_plas 1	(predict for XP_024459198.2)

Subcellular
localization
TargetP

chlo 9	(predict for XP_024459197.2)
chlo 9	(predict for XP_024459198.2)

Gene expression

All samples

[Expression pattern]

Tissue specificity^*

	Gene	Function	KEGG					Entrez Gene ID	Other ID	Link	Target		Reference
	Gene	Function	KEGG					Entrez Gene ID	Other ID	Link	ppo-u.5 for 7468650 .	ppo-r.4 for 7468650 .	ppo-u.5 for 7458378 .	gma-u.5 for 100788511 .	gma-u.5 for 100780104 .	mtr-u.5 for 11431505 .	ath-u.5 for AT2G25320 .	vvi-u.5 for 100259525 .	sly-u.5 for 101267123 .	osa-u.5 for 4329970 .	zma-u.5 for 103655564 .

Ortholog ID: 6501

Species

ath

gma

sly

osa

zma

bra

vvi

ppo

mtr

tae

hvu

ghi

bna

sbi

sot

cit

bdi

nta

Symbol

Function^*

TRAF-like family protein

uncharacterized LOC100788511

uncharacterized LOC100780104

uncharacterized LOC101267123

uncharacterized LOC4329970

uncharacterized LOC103655564

uncharacterized LOC103864665

uncharacterized LOC103842192

uncharacterized LOC100259525

uncharacterized LOC7458378

uncharacterized LOC7468650

uncharacterized LOC11431505

uncharacterized LOC123144815

uncharacterized LOC123137458

uncharacterized LOC123406227

uncharacterized LOC107906867

uncharacterized LOC107906868

uncharacterized LOC106363677

uncharacterized LOC106446692

uncharacterized LOC8059681

uncharacterized LOC102581430

uncharacterized LOC102629875

uncharacterized LOC100836358

uncharacterized LOC107764257

uncharacterized LOC107795028

Coexmap

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Coexpression

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KEGG Info

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
ath04120	Ubiquitin mediated proteolysis	3

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
gma04148	Efferocytosis	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
gma04142	Lysosome	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
sly03040	Spliceosome	4
sly04120	Ubiquitin mediated proteolysis	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
osa03018	RNA degradation	3
osa03013	Nucleocytoplasmic transport	3
osa04075	Plant hormone signal transduction	2
osa04120	Ubiquitin mediated proteolysis	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
zma03082	ATP-dependent chromatin remodeling	2
zma04120	Ubiquitin mediated proteolysis	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
bra03040	Spliceosome	3

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
vvi04120	Ubiquitin mediated proteolysis	4

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
ppo03082	ATP-dependent chromatin remodeling	3
ppo03083	Polycomb repressive complex	2
ppo03250	Viral life cycle - HIV-1	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
ppo04120	Ubiquitin mediated proteolysis	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
tae03082	ATP-dependent chromatin remodeling	4
tae03460	Fanconi anemia pathway	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
tae03440	Homologous recombination	3
tae04120	Ubiquitin mediated proteolysis	3
tae03460	Fanconi anemia pathway	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
bna04141	Protein processing in endoplasmic reticulum	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
bna04141	Protein processing in endoplasmic reticulum	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
sbi03040	Spliceosome	6

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
sot03040	Spliceosome	6

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
cit03040	Spliceosome	4
cit04120	Ubiquitin mediated proteolysis	3
cit03015	mRNA surveillance pathway	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
nta03250	Viral life cycle - HIV-1	2
nta03082	ATP-dependent chromatin remodeling	2
nta03040	Spliceosome	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
nta03250	Viral life cycle - HIV-1	2
nta03040	Spliceosome	2

Expression

Expression pattern

Entrez Gene ID^*

817070

100788511

100780104

101267123

4329970

103655564

103864665

103842192

100259525

7458378

7468650

11431505

123144815

123137458

123406227

107906867

107906868

106363677

106446692

8059681

102581430

102629875

100836358

107764257

107795028

Select Species^**

Orthologous genes in OrthoFinder^**

Top 50 coexpressed genes to 7468650 (ppo-u.5 coexpression data)

Top 50 enrichment test to 7468650 (ppo-u.5 coexpression data)


Species	ppo	gma	mtr	ath	vvi	sly	osa	zma	hvu	sot	tae	nta	bra	cit	ghi	bna	bdi	sbi	cre
Paralog	3	2	1	1	1	1	1	1	0	0	0	0	0	0	0	0	0	0	0

Select Species**

Orthologous genes in OrthoFinder**

Top 50 coexpressed genes to 7468650 (ppo-u.5 coexpression data)

Top 50 enrichment test to 7468650 (ppo-u.5 coexpression data)

Select Species^**

Orthologous genes in OrthoFinder^**