ATTED-II : GeneCoexpression result

Species	Gene	Description
gma-u.5	100788899	RNA-binding protein 24
gma-r.7	100788899	RNA-binding protein 24
gma-u.5	100786208	RNA-binding protein 24-B
mtr-u.5	25500626	RNA-binding protein 38
ppo-u.5	7478798	uncharacterized LOC7478798
ppo-u.5	7455359	uncharacterized LOC7455359
ath-u.5	AT2G46780	RNA-binding (RRM/RBD/RNP motifs) family protein
vvi-u.5	100257521	uncharacterized LOC100257521
vvi-u.5	104882246	uncharacterized LOC104882246

functional annotation

KEGG

GO BP

GO CC

GO MF

GO:0003723 [list] [network] RNA binding

(2019 genes)

IEA

Protein

XP_006598880.1 [sequence] [blastp]
XP_006598881.1 [sequence] [blastp]
XP_040866658.1 [sequence] [blastp]

Subcellular
localization
wolf

nucl 9, nucl_plas 6	(predict for XP_006598880.1)
nucl 9, nucl_plas 6	(predict for XP_006598881.1)
nucl 9, nucl_plas 6	(predict for XP_040866658.1)

Subcellular
localization
TargetP

other 7, mito 4	(predict for XP_006598880.1)
other 7, mito 4	(predict for XP_006598881.1)
other 7, mito 4	(predict for XP_040866658.1)

Gene expression

All samples

[Expression pattern]

Tissue specificity^*

	Gene	Function	KEGG					Entrez Gene ID	Other ID	Link	Target		Reference
	Gene	Function	KEGG					Entrez Gene ID	Other ID	Link	gma-u.5 for 100788899 .	gma-r.7 for 100788899 .	gma-u.5 for 100786208 .	mtr-u.5 for 25500626 .	ppo-u.5 for 7478798 .	ppo-u.5 for 7455359 .	ath-u.5 for AT2G46780 .	vvi-u.5 for 100257521 .	vvi-u.5 for 104882246 .

Ortholog ID: 11949

Species

ath

gma

bra

vvi

ppo

mtr

ghi

bna

cit

Symbol

Function^*

RNA-binding (RRM/RBD/RNP motifs) family protein

RNA-binding protein 24-B

probable RNA-binding protein ARP1

uncharacterized LOC104882246

uncharacterized LOC100257521

uncharacterized LOC7478798

uncharacterized LOC7455359

RNA-binding protein 38

RNA-binding protein 24-B

probable RNA-binding protein ARP1

uncharacterized LOC102620234

Coexmap

Please wait a moment.

Coexpression

Please wait a moment.

KEGG Info

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
vvi00380	Tryptophan metabolism	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
vvi01240	Biosynthesis of cofactors	3
vvi00061	Fatty acid biosynthesis	2
vvi00780	Biotin metabolism	2
vvi01212	Fatty acid metabolism	2
vvi00541	Biosynthesis of various nucleotide sugars	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
ppo04075	Plant hormone signal transduction	4

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
ppo04075	Plant hormone signal transduction	8

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
ghi00510	N-Glycan biosynthesis	2
ghi03022	Basal transcription factors	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
cit03030	DNA replication	5

Expression

Expression pattern

Entrez Gene ID^*

819291

100786208

103866433

103866305

104882246

100257521

7478798

7455359

25500626

107911274

107953004

106450476

125574983

102620234


Species	gma	mtr	ppo	ath	vvi	sly	sbi	nta	bra	osa	cre	cit	hvu	bdi	sot	zma	tae	bna	ghi
Paralog	3	1	2	1	2	0	0	0	0	0	0	0	0	0	0	0	0	0	0

Select Species^**

Orthologous genes in OrthoFinder^**

Top 50 coexpressed genes to 100788899 (gma-u.5 coexpression data)

Top 50 enrichment test to 100788899 (gma-u.5 coexpression data)

Select Species**

Orthologous genes in OrthoFinder**

Top 50 coexpressed genes to 100788899 (gma-u.5 coexpression data)

Top 50 enrichment test to 100788899 (gma-u.5 coexpression data)

Select Species^**

Orthologous genes in OrthoFinder^**