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Orthologous genes in OrthoFinder**

Species Gene Description
 ghi-r.1   107953004   RNA-binding protein 24-B 
 ghi-r.1   107954420   RNA-binding protein 38 
 ghi-r.1   107923693   RNA-binding protein 38 
 ghi-r.1   107911274   RNA-binding protein 38 
 ath-u.5   AT2G46780   RNA-binding (RRM/RBD/RNP motifs) family protein 
 bra-r.6   103866433   probable RNA-binding protein ARP1 
 bra-r.6   103866305   probable RNA-binding protein ARP1 
 bna-r.1   106450476   probable RNA-binding protein ARP1 
 bna-r.1   106412218   probable RNA-binding protein ARP1 
 bna-r.1   106391974   probable RNA-binding protein ARP1 
 cit-r.1   102620234   uncharacterized LOC102620234 
 gma-u.5   100788899   RNA-binding protein 24 
 vvi-u.5   100257521   uncharacterized LOC100257521 
 vvi-u.5   104882246   uncharacterized LOC104882246 
 ppo-u.5   7478798   uncharacterized LOC7478798 
 ppo-u.5   7455359   uncharacterized LOC7455359 
 mtr-u.5   25500626   RNA-binding protein 38 

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Top 50 coexpressed genes to 107953004 (ghi-r.1 coexpression data)

 KEGG ID   Pathway name   #genes in coex list   #genes in genome   -log10(p)   Link to the KEGG* map 
(Multiple genes)

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Top 50 enrichment test to 107953004 (ghi-r.1 coexpression data)

CoexMap"107953004"


ghiLOC107953004 | Entrez gene ID : 107953004    
Species ghi ath bra bna cit gma vvi ppo mtr sot zma cre sbi sly nta tae osa hvu bdi
Paralog 4 1 2 3 1 1 2 2 1 0 0 0 0 0 0 0 0 0 0
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CoexMap
Chloroplast
Nucleus

functional annotation
KEGG
GO BP
GO CC
GO MF
GO:0003723 [list] [network] RNA binding  (3053 genes)  IEA  
Protein XP_016743717.1 [sequence] [blastp]
XP_016743718.1 [sequence] [blastp]
XP_040973846.1 [sequence] [blastp]
XP_040973847.1 [sequence] [blastp]
XP_040973848.1 [sequence] [blastp]
Subcellular
localization
wolf
nucl 9,  nucl_plas 5  (predict for XP_016743717.1)
nucl 10  (predict for XP_016743718.1)
nucl 10  (predict for XP_040973846.1)
nucl 10  (predict for XP_040973847.1)
nucl 10  (predict for XP_040973848.1)
Subcellular
localization
TargetP
other 7,  mito 5  (predict for XP_016743717.1)
other 7,  mito 5  (predict for XP_016743718.1)
other 7,  mito 5  (predict for XP_040973846.1)
other 8  (predict for XP_040973847.1)
other 8  (predict for XP_040973848.1)
Gene expression
All samples [Expression pattern]
Tissue specificity*
Show Coexpressed Genes
Gene Function KEGG Entrez
Gene
ID		 Other ID Link Target Reference

ghi-r.1
for
107953004
ghi-r.1
for
107954420
ghi-r.1
for
107923693
ghi-r.1
for
107911274
ath-u.5
for
AT2G46780
bra-r.6
for
103866433
bra-r.6
for
103866305
bna-r.1
for
106450476
bna-r.1
for
106412218
bna-r.1
for
106391974
cit-r.1
for
102620234
gma-u.5
for
100788899
vvi-u.5
for
100257521
vvi-u.5
for
104882246
ppo-u.5
for
7478798
ppo-u.5
for
7455359
mtr-u.5
for
25500626


Ortholog ID: 11949
Species ghi ghi ghi ath bra bra bna bna bna cit gma vvi vvi ppo ppo mtr
Symbol LOC107953004 LOC107923693 LOC107911274 AT2G46780 LOC103866433 LOC103866305 LOC106450476 LOC106391974 LOC125574983 LOC102620234 LOC100786208 LOC100257521 LOC104882246 LOC7478798 LOC7455359 LOC25500626
Function* RNA-binding protein 24-B RNA-binding protein 38 RNA-binding protein 38 RNA-binding (RRM/RBD/RNP motifs) family protein probable RNA-binding protein ARP1 probable RNA-binding protein ARP1 probable RNA-binding protein ARP1 probable RNA-binding protein ARP1 probable RNA-binding protein ARP1 uncharacterized LOC102620234 RNA-binding protein 24-B uncharacterized LOC100257521 uncharacterized LOC104882246 uncharacterized LOC7478798 uncharacterized LOC7455359 RNA-binding protein 38
Coexmap

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Coexpression

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KEGG Info
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi00510 N-Glycan biosynthesis 2
ghi03022 Basal transcription factors 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cit03030 DNA replication 5
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
vvi01240 Biosynthesis of cofactors 3
vvi00061 Fatty acid biosynthesis 2
vvi00780 Biotin metabolism 2
vvi01212 Fatty acid metabolism 2
vvi00541 Biosynthesis of various nucleotide sugars 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
vvi00380 Tryptophan metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ppo04075 Plant hormone signal transduction 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ppo04075 Plant hormone signal transduction 8
Expression Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern
Entrez Gene ID* 107953004 107923693 107911274 819291 103866433 103866305 106450476 106391974 125574983 102620234 100786208 100257521 104882246 7478798 7455359 25500626
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